The categories below provide views of the different types of data. Each category includes details of the data available, template queries which include these data and starting points for building your own query using these data. NOTE: All external links open in a new window.
| Data Category | Organism | Data | Source | PubMed | Note |
|---|---|---|---|---|---|
|
Genomics |
D. melanogaster | Genome annotation - Release 5.1 | Flybase | Crosby et al - PubMed: 17099233 | |
|
Comparative Genomics |
D. melanogaster C. elegans |
Orthologue and paralogue relationships between these 2 organisms | InParanoid - Version 5.1 | O'Brien et al - PubMed: 15608241 | |
|
Proteins |
D. melanogaster | Protein annotation | UniProt - Release 12.2 | UniProt Consortium - PubMed: 17142230 | |
| C. elegans | Protein annotation | UniProt - Release 12.2 | UniProt Consortium - PubMed: 17142230 | ||
| D. melanogaster | Protein family and domain assignments to proteins | InterPro - Release 15.1 | Mulder et al - PubMed: 17202162 | ||
| C. elegans | Protein family and domain assignments to proteins | InterPro - Release 15.1 | Mulder et al - PubMed: 17202162 | ||
|
Gene Ontology |
D. melanogaster | GO annotations | Gene Ontology Site - 21th May 2007 | Gene Ontology Consortium - PubMed:10802651 | |
| C. elegans | GO annotations | Gene Ontology Site - 13th June 2007 | Gene Ontology Consortium - PubMed:10802651 | ||
|
Gene Expression |
D. melanogaster | Microarray-based gene expression data for the life cycle of D. melanogaster | ArrayExpress - Experiment E-FLYC-6 | Arbeitman et al - PubMed: 12351791 | |
| D. melanogaster | Affymetrix microarray-based atlas of gene expression in larval and adult tissues | FlyAtlas - 3rd April 2007 | Chintapalli et al - PubMed: 17534367 | ||
|
Transcriptional Regulation |
D. melanogaster | Regulatory elements | Flybase | Crosby et al - PubMed: 17099233 | |
|
Literature |
D. melanogaster | Gene versus publications | NCBI - 14th December 2006 | ||
| C. elegans | Gene versus publications | NCBI - 14th December 2006 |
