The categories below provide views of the different types of data. Each category includes details of the data available, template queries which include these data and starting points for building your own query using these data. NOTE: All external links open in a new window.
| Data Category | Organism | Data | Source | PubMed | Note |
|---|---|---|---|---|---|
|
modENCODE |
D. melanogaster | See all fly modENCODE submissions | |||
| C. elegans | See all worm modENCODE submissions | ||||
|
Genomics |
D. melanogaster | Genome annotation - Release 5.1 | FlyBase - FB2010_02 | Crosby et al - PubMed: 17099233 | |
| C. elegans | Genome annotation | WormBase - WS190 | - | ||
|
Comparative Genomics |
D. melanogaster C. elegans |
Orthologue and paralogue relationships between these 2 organisms | InParanoid - Version 7 | O'Brien et al - PubMed: 15608241 | |
|
Proteins |
D. melanogaster | Protein annotation | UniProt - Release 15.14 | UniProt Consortium - PubMed: 17142230 | |
| C. elegans | Protein annotation | UniProt - Release 15.14 | UniProt Consortium - PubMed: 17142230 | ||
| D. melanogaster | Protein family and domain assignments to proteins | InterPro - (from UniProt Release 15.14) | Mulder et al - PubMed: 17202162 | ||
| C. elegans | Protein family and domain assignments to proteins | InterPro - (from UniProt Release 15.14) | Mulder et al - PubMed: 17202162 | ||
|
Gene Ontology |
D. melanogaster | GO annotations | Gene Ontology Site - 24th February 2010 | Gene Ontology Consortium - PubMed:10802651 | |
| C. elegans | GO annotations | Gene Ontology Site - 24th February 2010 | Gene Ontology Consortium - PubMed:10802651 | ||
|
Literature |
D. melanogaster | Gene versus publications | NCBI - 24th February 2010 | ||
| C. elegans | Gene versus publications | NCBI - 24th February 2010 |
