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Protein Domain : IPR013655

Name  PAS fold-3 Short Name  PAS_fold_3
Type  Domain Description  The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].

Publication Counts Displayer

0 Child Features

2 Contains

DB identifier Name Short Name Type
IPR001610 PAC motif PAC Repeat
IPR000700 PAS-associated, C-terminal PAS-assoc_C Domain

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
PF08447 PFAM IPR013655

3 Data Sets

Name URL
TrEMBL data set http://www.ebi.ac.uk/trembl/
InterPro data set  
InterPro GO Annotation data set  

2 Found In

DB identifier Name Short Name Type
IPR003950 Potassium channel, voltage-dependent, ELK K_chnl_volt-dep_ELK Family
IPR015524 Period circadian protein 3 Per_circ_prot_3 Family

1 GO Annotation


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
PAS fold-3   GO:0005515 protein binding

1 Ontology Annotations


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
PAS fold-3   GO:0005515 protein binding

1 Parent Features

DB identifier Name Short Name Type
IPR000014 PAS domain PAS Domain

33 Proteins

DB identifier Primary Accession
Organism . Name
FBpp0082768 Q9VEV9 Drosophila melanogaster
FBpp0310748 B7Z0S3 Drosophila melanogaster
FBpp0310747 Q24167 Drosophila melanogaster
FBpp0293064 H9TV77 Drosophila melanogaster
FBpp0303179 Q24119 Drosophila melanogaster
FBpp0306033 M9PDQ7 Drosophila melanogaster
FBpp0306032 M9PE27 Drosophila melanogaster
FBpp0303180 M9PDI8 Drosophila melanogaster
FBpp0283113 Q29C65 Drosophila pseudoobscura
FBpp0277906 Q29FF1 Drosophila pseudoobscura
FBpp0300706 I5APE8 Drosophila pseudoobscura
FBpp0300705 Q295V9 Drosophila pseudoobscura
FBpp0165953 B4L8X9 Drosophila mojavensis
FBpp0172864 B4KDN6 Drosophila mojavensis
FBpp0226899 B4LCU8 Drosophila virilis
FBpp0237907 B4LWW7 Drosophila virilis
FBpp0255869 B4PLS5 Drosophila yakuba
FBpp0266032 B4PC64 Drosophila yakuba
FBpp0271326 B4PR02 Drosophila yakuba
AHR_CAEEL O44712 Caenorhabditis elegans
AHR_CAEEL-2 O44712-2 Caenorhabditis elegans
SIM_DROME P05709 Drosophila melanogaster
SIM_DROME-2 P05709-2 Drosophila melanogaster
TRH_DROME-2 Q24119-2 Drosophila melanogaster
TRH_DROME-3 Q24119-3 Drosophila melanogaster
TRH_DROME-6 Q24119-6 Drosophila melanogaster
TRH_DROME-1 Q24119-1 Drosophila melanogaster
E1JIM6_DROME E1JIM6 Drosophila melanogaster
Q5U0W0_DROME Q5U0W0 Drosophila melanogaster
F9W343_DROME F9W343 Drosophila melanogaster