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Protein Domain : IPR012677

Name  Nucleotide-binding, alpha-beta plait Short Name  Nucleotide-bd_a/b_plait
Type  Domain Description  This entry represents nucleotide-binding domains with an alpha-beta plait structure, which consists of either a ferredoxin-like (beta-alpha-beta)2 fold, such as that found in RNA-binding domains of various ribonucleoproteins or in viral DNA-binding domains [, ]; or a beta-(alpha)-beta-alpha-beta(2) fold, such as that found in the ribosomal protein L23 [].

Publication Counts Displayer

4 Child Features

DB identifier Name Short Name Type
IPR000504 RNA recognition motif domain RRM_dom Domain
IPR012678 Ribosomal protein L23/L15e core domain Ribosomal_L23/L15e_core_dom Domain
IPR015245 Nuclear RNA export factor Tap, RNA-binding domain Tap_RNA-bd Domain
IPR014789 Poly(A)-specific ribonuclease, RNA-binding PolyA-riboNase_RNA_binding Domain

4 Contains

DB identifier Name Short Name Type
IPR000504 RNA recognition motif domain RRM_dom Domain
IPR001014 Ribosomal protein L23/L25, conserved site Ribosomal_L23/L25_CS Conserved_site
IPR014886 RNA-binding motif RRM_3 Domain
IPR018098 Ribosomal S24e conserved site Ribosomal_S24e_CS Conserved_site

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
G3DSA:3.30.70.330 GENE3D IPR012677

3 Data Sets

Name URL
Swiss-Prot data set http://ca.expasy.org/sprot
InterPro data set  
InterPro GO Annotation data set  

10 Found In

DB identifier Name Short Name Type
IPR017334 Eukaryotic translation initiation factor 3 subunit G eIF3_g Family
IPR013025 Ribosomal protein L25/L23 Ribosomal_L25/23 Family
IPR016967 Splicing factor, SPF45 Splicing_factor_SPF45 Family
IPR016304 Cyclophilin-type peptidyl-prolyl cis-trans isomerase E Cyclophilin-type_PPIase_E Family
IPR005120 Regulator of nonsense-mediated decay, UPF3 Nonsense_mediated_decay_UPF3 Domain
IPR006509 Splicing factor, RBM39-like RBM39_SF Family
IPR019985 Ribosomal protein L23 Ribosomal_L23 Family
IPR017325 RNA binding protein Fox-1 RNA-bd_Fox-1 Family
IPR017347 Heterogeneous nuclear ribonucleoprotein C, Raly hnRNP_C_Raly Family
IPR000427 Papillomavirus E2, C-terminal Papillomavirus_E2_C Domain

1 GO Annotation


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
Nucleotide-binding, alpha-beta plait   GO:0000166 nucleotide binding

1 Ontology Annotations


Subject . Secondary Identifier

Subject . Name

Subject . Symbol

Ontology Term . Identifier

Ontology Term . Name
Nucleotide-binding, alpha-beta plait   GO:0000166 nucleotide binding

0 Parent Features

1737 Proteins

DB identifier Primary Accession
Organism . Name
FBpp0077073 Q9VR26 Drosophila melanogaster
FBpp0077074 Q86BN2 Drosophila melanogaster
FBpp0289689 Q6NN06 Drosophila melanogaster
FBpp0076265 Q24207 Drosophila melanogaster
FBpp0304242 M9PF25 Drosophila melanogaster
FBpp0076266 A4V1Q1 Drosophila melanogaster
FBpp0075671 Q9VU18 Drosophila melanogaster
FBpp0075670 Q8IQH5 Drosophila melanogaster
FBpp0271745 Q8IQH4 Drosophila melanogaster
FBpp0070173 Q9V3V1 Drosophila melanogaster
FBpp0076925 Q0KHQ1 Drosophila melanogaster
FBpp0076556 Q94901 Drosophila melanogaster
FBpp0074056 Q8IR13 Drosophila melanogaster
FBpp0089381 Q7KUX7 Drosophila melanogaster
FBpp0074055 Q9VXF8 Drosophila melanogaster
FBpp0075370 Q9VUN2 Drosophila melanogaster
FBpp0112865 A8QI32 Drosophila melanogaster
FBpp0089110 Q8IH14 Drosophila melanogaster
FBpp0080786 Q9VIV2 Drosophila melanogaster
FBpp0290706 Q8IHC3 Drosophila melanogaster
FBpp0084078 Q8IMV6 Drosophila melanogaster
FBpp0084077 Q9VC33 Drosophila melanogaster
FBpp0099843 Q7K1P7 Drosophila melanogaster
FBpp0071846 Q9W229 Drosophila melanogaster
FBpp0071671 Q5U0V7 Drosophila melanogaster
FBpp0071961 Q9W1T4 Drosophila melanogaster
FBpp0081902 Q9VGJ3 Drosophila melanogaster
FBpp0074808 Q9VVV7 Drosophila melanogaster
FBpp0111841 A8JUT5 Drosophila melanogaster
FBpp0072687 Q9W0A8 Drosophila melanogaster