modENCODE |  Help |  blog

Gene : CG9090 D. melanogaster
DB identifier  ? FBgn0034497 Secondary Identifier  ? CG9090
Source  FlyBase
  • synonyms:
  • FBgn0034497,
  • CG9090,
  • FBan0009090
Paste the following link
Lists
This Gene is in one list:
Fly classII (760)

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

3 Alleles

DB identifier Symbol Allele Class Organism
FBal0206106 CG9090[GD2105]   Drosophila melanogaster
FBal0236576 CG9090[KK109958]   Drosophila melanogaster
FBal0276278 CG9090[NIG.9090R]   Drosophila melanogaster

90 Clones

Secondary Identifier DB identifier
EK102946 FBcl0046588
EK112411 FBcl0046712
EK151704 FBcl0047814
EK195862 FBcl0047876
EP17601 FBcl0086775
GH18502 FBcl0114437
GH27296 FBcl0115187
GH21329 FBcl0115209
GH04816 FBcl0115219
GH18731 FBcl0115223
GH17473 FBcl0115225
GH24322 FBcl0115229
GH20779 FBcl0115233
GH16235 FBcl0115237
GH16017 FBcl0115239
GH10862 FBcl0115243
GH18905 FBcl0115245
GH15386 FBcl0115249
GH24295 FBcl0115251
GH16087 FBcl0115255
GH20372 FBcl0115257
GH23492 FBcl0115261
GH17281 FBcl0115263
GH20392 FBcl0115265
GH02695 FBcl0115267
GH23406 FBcl0115269
GH18363 FBcl0115271
GH14355 FBcl0115277
GH23639 FBcl0115279
GH12307 FBcl0115281

6 Exons

DB identifier Symbol
FBgn0034497:6 CG9090:6
FBgn0034497:3 CG9090:3
FBgn0034497:2 CG9090:2
FBgn0034497:1 CG9090:1
FBgn0034497:5 CG9090:5
FBgn0034497:4 CG9090:4

3 Transcripts

DB identifier Gene
FBtr0086303 CG9090
FBtr0342680 CG9090
FBtr0342679 CG9090

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0086303-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0342679-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0342680-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0086303-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0342679-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0342680-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
37297 NCBI Entrez Gene identifiers FBgn0034497
62952 BioGRID FBgn0034497

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 131.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 366.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 523.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 276.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 119.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 245.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 266.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 97.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 189.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 322.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 203.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 55.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 198.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 198.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 490.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 102.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 520.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 276.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 177.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 238.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 180.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 82.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 150.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 86.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 67.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 283.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 86.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 146.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 119.0
FBgn0034497 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 255.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0034497:4_FBgn0034497:3 Drosophila melanogaster
intron_FBgn0034497:3_FBgn0034497:2 Drosophila melanogaster
intron_FBgn0034497:2_FBgn0034497:1 Drosophila melanogaster
intron_FBgn0034497:6_FBgn0034497:3 Drosophila melanogaster
intron_FBgn0034497:5_FBgn0034497:3 Drosophila melanogaster

11 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG9090 none -0.005196133   19067489
Lipid storage CG9090 none 0   19067489
Cell size and cell-cycle regulation (1) CG9090 none sp   16496002
Cell size and cell-cycle regulation (1) CG9090 none sp   16496002
Muscle morphogenesis and function (1) CG9090 Lethal np   20220848
Heat nociception (1) CG9090 none 0.43   21074052
Heart development and function (1) CG9090 none 1   20371351
Notch pathway regulation (4) CG9090 none 0   19363474
Hippo pathway regulation CG9090 none 0.48   23263283
Glycosylation regulation (1) CG9090 Increased alpha1,3-fucose Chp glycosylation, increased alpha1,6-fucose Chp glycosylation, increased (GlcNAc)n Chp glycosylation sp   21203496
Glycosylation regulation (2) CG9090 none np   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom