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Gene : salr D. melanogaster

DB identifier  ? FBgn0000287 Secondary Identifier  ? CG4881
Name  ? spalt-related Source  FlyBase
  • synonyms:
  • spalt related,
  • sal related,
  • sal-related,
  • Chorion factor 3,
  • Sal-r,
  • FBgn0000287,
  • 32F,
  • Spalt-related,
  • Cf3,
  • CG4881,
  • Salr,
  • sal,
  • FBan0004881,
  • Spalt

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12 Alleles

DB identifier Symbol Allele Class Organism
FBal0101164 salr[FCK-20]   Drosophila melanogaster
FBal0101163 salr[FCK-25]   Drosophila melanogaster
FBal0101162 salr[FCK-68]   Drosophila melanogaster
FBal0051185 salr[FCK-73] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0158704 salr[unspecified]   Drosophila melanogaster
FBal0051184 salr[Scer\UAS.cBa]   Drosophila melanogaster
FBal0210506 salr[GD12797]   Drosophila melanogaster
FBal0242404 salr[JF03226]   Drosophila melanogaster
FBal0247583 salr[Scer\UAS.T:Avic\GFP-EYFP]   Drosophila melanogaster
FBal0247584 salr[IKEA.IKVA.Scer\UAS.T:Avic\GFP-EYFP]   Drosophila melanogaster
FBal0268719 salr[Scer\UAS.cSa]   Drosophila melanogaster
FBal0274417 salr[NIG.4881R]   Drosophila melanogaster

16 Clones

Secondary Identifier DB identifier
AT29292 FBcl0032379
AT17006 FBcl0032383
AT11192 FBcl0032387
AT14771 FBcl0032393
AT15446 FBcl0032403
AT24316 FBcl0032421
AT14748 FBcl0032429
bs69f03 FBcl0054609
EK248734 FBcl0092696
EK133749 FBcl0093072
EK131423 FBcl0093208
EK157514 FBcl0093662
145964 FBcl0402761
15366 FBcl0402756
18801 FBcl0402758
42878 FBcl0402768

10 Exons

DB identifier Symbol
FBgn0000287:2 salr:2
FBgn0000287:4 salr:4
FBgn0000287:5 salr:5
FBgn0000287:6 salr:6
FBgn0000287:7 salr:7
FBgn0000287:8 salr:8
FBgn0000287:9 salr:9
FBgn0000287:3 salr:3
FBgn0000287:1 salr:1
FBgn0000287:10 salr:10

3 Transcripts

DB identifier Gene
FBtr0080235 salr
FBtr0080236 salr
FBtr0307093 salr

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080235-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0080236-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0307093-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080235-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080236-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0307093-3-prime-utr Drosophila melanogaster

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0 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34568 NCBI Entrez Gene identifiers FBgn0000287

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 129.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 83.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 108.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 100.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 202.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 85.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 155.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 41.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 188.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 56.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 130.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 128.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 251.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 190.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 106.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 193.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 160.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 207.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 81.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 99.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 234.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 93.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 124.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 50.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 315.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 111.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 133.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 60.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 29.0
FBgn0000287 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 149.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0000287:1_FBgn0000287:4 Drosophila melanogaster
intron_FBgn0000287:4_FBgn0000287:5 Drosophila melanogaster
intron_FBgn0000287:5_FBgn0000287:6 Drosophila melanogaster
intron_FBgn0000287:6_FBgn0000287:7 Drosophila melanogaster
intron_FBgn0000287:7_FBgn0000287:8 Drosophila melanogaster
intron_FBgn0000287:8_FBgn0000287:10 Drosophila melanogaster
intron_FBgn0000287:2_FBgn0000287:4 Drosophila melanogaster
intron_FBgn0000287:8_FBgn0000287:9 Drosophila melanogaster
intron_FBgn0000287:3_FBgn0000287:4 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage salr none 1.823717981   19067489
Lipid storage salr none 1.005148969   19067489
Cell size and cell-cycle regulation (1) salr none sp   16496002
Dendrite pattern formation salr none np   16547170
Muscle morphogenesis and function (1) salr Lethal np   20220848
Muscle morphogenesis and function (1) salr Lethal np   20220848
Muscle morphogenesis and function (3) salr Fading Z-line np   20220848
Heat nociception (1) salr none 0.02   21074052
Heat nociception (1) salr none -0.4   21074052
Heart development and function (1) salr none 1   20371351
Serratia marcescens infection (1) salr none 0.601769911504424   19520911
Notch pathway regulation (4) salr Notum malformation death 9   19363474
Notch pathway regulation (4) salr Bristle morphology defects, notum malformation death sp   19363474
Self-renewal and differentiation in neural stem cells salr Neuroblast smaller cell size, neuroblast less large cells, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with smaller neuroblast cell size, neuroblasts smaller, neuroblast underproliferation, lethal sp   21549331
Hippo pathway regulation salr none -1.76   23263283
Glycosylation regulation (1) salr none sp   21203496

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