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Gene : Vps20 D. melanogaster

DB identifier  ? FBgn0034744 Secondary Identifier  ? CG4071
Name  ? Vacuolar protein sorting 20 Source  FlyBase
  • synonyms:
  • FBgn0027684,
  • Vps20,
  • anon-EST:Posey40,
  • CG4071,
  • ESCRT-III,
  • DmVPS20,
  • FBan0004071,
  • FBgn0034744

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6 Alleles

DB identifier Symbol Allele Class Organism
FBal0230477 Vps20[I3]   Drosophila melanogaster
FBal0232069 Vps20[KK102883]   Drosophila melanogaster
FBal0208989 Vps20[GD11211]   Drosophila melanogaster
FBal0208990 Vps20[GD16875]   Drosophila melanogaster
FBal0279174 Vps20[HMS02142]   Drosophila melanogaster
FBal0274078 Vps20[NIG.4071R]   Drosophila melanogaster

66 Clones

Secondary Identifier DB identifier
AF171774 FBcl0000283
EK098529 FBcl0038360
EK255243 FBcl0038404
GH16963 FBcl0123557
RE19570 FBcl0220637
RH37935 FBcl0261089
RH66817 FBcl0261181
RH31535 FBcl0261213
IP02019 FBcl0347138
Dmel_dig_012990_0716_1244 FBcl0378889
CK01.127D.B4 FBcl0473315
RP003568350 FBcl0646876
RP003040664 FBcl0646877
RP003666258 FBcl0646878
RP003631307 FBcl0646879
RP003162617 FBcl0646880
RP003053179 FBcl0646881
RP003378548 FBcl0646882
RP003028018 FBcl0646883
RP003587100 FBcl0646884
RP003287009 FBcl0646885
RP003646308 FBcl0646886
RP003448339 FBcl0646887
RP003315272 FBcl0646888
RP003653029 FBcl0646889
RP003208569 FBcl0646890
RP003494426 FBcl0646891
RP003520199 FBcl0646892
RP003084885 FBcl0646893
RP003662653 FBcl0646894

5 Exons

DB identifier Symbol
FBgn0034744:3 Vps20:3
FBgn0034744:4 Vps20:4
FBgn0034744:5 Vps20:5
FBgn0034744:1 Vps20:1
FBgn0034744:2 Vps20:2

2 Transcripts

DB identifier Gene
FBtr0071856 Vps20
FBtr0308602 Vps20

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071856-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308602-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071856-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0308602-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37581 NCBI Entrez Gene identifiers FBgn0034744
63197 BioGRID FBgn0034744

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1358.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1821.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 470.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1138.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1131.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 439.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1907.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2006.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1258.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2294.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1840.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 488.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1299.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1219.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1134.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 950.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1412.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1504.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1325.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1528.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1138.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1299.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1456.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1952.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1040.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1812.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 284.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 857.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 638.0
FBgn0034744 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 869.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0034744:3_FBgn0034744:4 Drosophila melanogaster
intron_FBgn0034744:4_FBgn0034744:5 Drosophila melanogaster
intron_FBgn0034744:1_FBgn0034744:2 Drosophila melanogaster
intron_FBgn0034744:2_FBgn0034744:4 Drosophila melanogaster

23 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Vps20 none -0.712120074   19067489
Lipid storage Vps20 none 6.165404746   19067489
Cell size and cell-cycle regulation (1) Vps20 none sp   16496002
Cell size and cell-cycle regulation (1) Vps20 none sp   16496002
M. smegmatis infection Vps20 No effect on M. smegmatis infection np   18287038
Muscle morphogenesis and function (1) Vps20 none np   20220848
Heat nociception (1) Vps20 Lethal -0.88   21074052
Heat nociception (1) Vps20 none 0.02   21074052
Heart development and function (1) Vps20 none 1   20371351
Serratia marcescens infection (1) Vps20 none -1.44   19520911
Serratia marcescens infection (1) Vps20 none 0.324324324324324   19520911
Notch pathway regulation (4) Vps20 Bristle morphology defects, notum malformation death sp   19363474
Notch pathway regulation (4) Vps20 Completely lethal (pupal) sp   19363474
Notch pathway regulation (3) Vps20 Upregulation of Notch pathway np   20493818
Notch pathway regulation (4) Vps20 Lethal strong en-GAL4 20493818
Notch pathway regulation (4) Vps20 none np en-GAL4 20493818
Notch pathway regulation (4) Vps20 Delay of larval development; wing disc size: overgrown; wing disc NRE:EGFP: up, ectopic, gap sp en-GAL4 20493818
Adiposity regulation (1) Vps20 none -0.365   20074523
Adiposity regulation (1) Vps20 none 0.276   20074523
Wnt proteins secretion Vps20 none 0.9   22094269
Hippo pathway regulation Vps20 none 1.75   23263283
Glycosylation regulation (1) Vps20 Decreased mannose Chp glycosylation sp   21203496
Glycosylation regulation (2) Vps20 Effect on Chp glycosylation np   21203496

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