modENCODE |  Help |  blog

Gene : Spn42Dd D. melanogaster

DB identifier  ? FBgn0028988 Secondary Identifier  ? CG9456
Name  ? Serpin 42Dd Source  FlyBase
  • synonyms:
  • CG9456,
  • Spn1,
  • serpin 1,
  • Serine protease inhibitor 1,
  • Spn42Dd,
  • FBgn0033114,
  • FBan0009456,
  • FBgn0028988,
  • sp1

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

6 Alleles

DB identifier Symbol Allele Class Organism
FBal0278653 Spn42Dd[GL01199]   Drosophila melanogaster
FBal0267764 Spn42Dd[oka] amorphic allele - molecular evidence Drosophila melanogaster
FBal0159738 Spn42Dd[f02145]   Drosophila melanogaster
FBal0267765 Spn42Dd[Scer\UAS.cFa]   Drosophila melanogaster
FBal0208595 Spn42Dd[GD5272]   Drosophila melanogaster
FBal0267766 Spn42Dd[NIG.cUa]   Drosophila melanogaster

12 Clones

Secondary Identifier DB identifier
CK02196 FBcl0059529
EK069659 FBcl0064222
EN16736 FBcl0094759
GH04125 FBcl0114115
GH05478 FBcl0114117
GH28573 FBcl0114119
GH27551 FBcl0114121
LP20971 FBcl0183551
RH48695 FBcl0251864
571377 FBcl0439288
CK01.88C.G10 FBcl0439178
CK01.100C.C2 FBcl0439223

4 Exons

DB identifier Symbol
FBgn0028988:1 Spn1:1
FBgn0028988:2 Spn1:2
FBgn0028988:3 Spn1:3
FBgn0028988:4 Spn1:4

1 Transcripts

DB identifier Gene
FBtr0300357 Spn42Dd

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0300357-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300357-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
49808 NCBI Entrez Gene identifiers FBgn0028988
72479 BioGRID FBgn0028988

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 167.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 56.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 251.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 143.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 454.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 167.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 647.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 28.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 55.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 268.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 480.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 233.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 220.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 190.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 62.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 205.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 55.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 87.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 218.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 122.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 92.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 202.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 26.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 496.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 66.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 51.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 88.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 43.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 119.0
FBgn0028988 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 62.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0028988:1_FBgn0028988:2 Drosophila melanogaster
intron_FBgn0028988:2_FBgn0028988:3 Drosophila melanogaster
intron_FBgn0028988:3_FBgn0028988:4 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Spn42Dd none -0.232427103   19067489
Lipid storage Spn42Dd none 0.84297216   19067489
Lipid storage Spn42Dd none 0.0760635   19067489
Lipid storage Spn42Dd none -0.206958825   19067489
Cell size and cell-cycle regulation (1) Spn42Dd none sp   16496002
Mutant human huntingtin aggregation Spn42Dd Increased mutant human huntingtin aggregation 1.5 - 2   19789644
Muscle morphogenesis and function (1) Spn42Dd Flightless np   20220848
Muscle morphogenesis and function (1) Spn42Dd Lethal np   20220848
Muscle morphogenesis and function (4) Spn42Dd Frayed myofibrils, fuzzy (broadened) Z-line np   20220848
Heat nociception (1) Spn42Dd none -1.17   21074052
Heat nociception (1) Spn42Dd Lethal -1.17   21074052
Heart development and function (1) Spn42Dd none 1   20371351
Heart development and function (1) Spn42Dd none 1   20371351
Serratia marcescens infection (1) Spn42Dd none 0.375   19520911
Serratia marcescens infection (1) Spn42Dd none 0.356164383561643   19520911
Notch pathway regulation (4) Spn42Dd none 0   19363474
Notch pathway regulation (4) Spn42Dd none 0   19363474
Adiposity regulation (1) Spn42Dd none -0.105   20074523
Adiposity regulation (1) Spn42Dd none -0.073   20074523
Hippo pathway regulation Spn42Dd none 0.16   23263283

0 Submissions