modENCODE |  Help |  blog

Gene : CG5815 D. melanogaster

DB identifier  ? FBgn0027574 Secondary Identifier  ? CG5815
Source  FlyBase
  • synonyms:
  • FBgn0027574,
  • FBan0005815,
  • BcDNA:GH07346,
  • Spt2,
  • BcDNA:GH07089

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

3 Alleles

DB identifier Symbol Allele Class Organism
FBal0131768 CG5815[KG02314]   Drosophila melanogaster
FBal0204831 CG5815[GD11776]   Drosophila melanogaster
FBal0274841 CG5815[NIG.5815R]   Drosophila melanogaster

40 Clones

Secondary Identifier DB identifier
EK291944 FBcl0004326
EK274140 FBcl0004604
EK279918 FBcl0006898
AT25255 FBcl0035453
AT12160 FBcl0035509
GH07089 FBcl0135485
LD07911 FBcl0162487
LD08875 FBcl0162492
RE73291 FBcl0237655
RE64245 FBcl0237670
RE50948 FBcl0237671
RE42291 FBcl0237672
RE27609 FBcl0237673
RE49077 FBcl0237680
RE25753 FBcl0237681
SD17731 FBcl0288770
SD20032 FBcl0288798
FGM229F03 FBcl0391396
CK01.118C.A6 FBcl0417092
FI02070 FBcl0474691
RP004505649 FBcl0568255
RP004223710 FBcl0568253
RP004540028 FBcl0568251
RP004261885 FBcl0568252
RP004261801 FBcl0568254
RP004495715 FBcl0568256
RP004377366 FBcl0568257
RP004060960 FBcl0568258
RP004091434 FBcl0568259
RP004210569 FBcl0568260

5 Exons

DB identifier Symbol
FBgn0027574:3 CG5815:3
FBgn0027574:1 CG5815:1
FBgn0027574:4 CG5815:4
FBgn0027574:5 CG5815:5
FBgn0027574:2 CG5815:2

2 Transcripts

DB identifier Gene
FBtr0339262 CG5815
FBtr0085106 CG5815

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085106-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0339262-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085106-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0339262-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

83 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43266 NCBI Entrez Gene identifiers FBgn0027574
68155 BioGRID FBgn0027574

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 338.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 336.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 256.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 283.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 409.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 203.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 387.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 518.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 448.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 444.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 295.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 205.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 261.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 283.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 297.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 308.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 396.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 298.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 263.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 389.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 250.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 395.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 395.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 426.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 301.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 993.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 747.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 538.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 505.0
FBgn0027574 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 514.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0027574:1_FBgn0027574:2 Drosophila melanogaster
intron_FBgn0027574:2_FBgn0027574:4 Drosophila melanogaster
intron_FBgn0027574:4_FBgn0027574:5 Drosophila melanogaster
intron_FBgn0027574:1_FBgn0027574:3 Drosophila melanogaster
intron_FBgn0027574:3_FBgn0027574:4 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG5815 none 0.194481164   19067489
Lipid storage CG5815 none -1.714078652   19067489
Cell size and cell-cycle regulation (1) CG5815 none sp   16496002
Muscle morphogenesis and function (1) CG5815 none np   20220848
Heat nociception (1) CG5815 none 0.75   21074052
Heart development and function (1) CG5815 none 1   20371351
Serratia marcescens infection (1) CG5815 none 0.6875   19520911
Serratia marcescens infection (1) CG5815 none 1.55681818181818   19520911
Notch pathway regulation (4) CG5815 none 0   19363474
Pol II elongation CG5815 Decreased Hsp70 mRNA expression 61 20 min heat shock 19279664
Adiposity regulation (1) CG5815 none -0.277   20074523
Hippo pathway regulation CG5815 none -0.44   23263283
Glycosylation regulation (1) CG5815 none sp   21203496

0 Submissions