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Gene : Vps28 D. melanogaster

DB identifier  ? FBgn0021814 Secondary Identifier  ? CG12770
Name  ? Vacuolar protein sorting 28 Source  FlyBase
  • synonyms:
  • FBgn0033254,
  • l(2)k16503,
  • Dvps28,
  • ESCRT-I,
  • ESCRT-II,
  • DmVps28,
  • Vps28,
  • FBan0012770,
  • CG12770,
  • FBgn0021814

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9 Alleles

DB identifier Symbol Allele Class Organism
FBal0064052 Vps28[k16519]   Drosophila melanogaster
FBal0064053 Vps28[k16503]   Drosophila melanogaster
FBal0230470 Vps28[A2]   Drosophila melanogaster
FBal0230471 Vps28[B9]   Drosophila melanogaster
FBal0215633 Vps28[MtnA.T:Hsap\MYC]   Drosophila melanogaster
FBal0215634 Vps28[Scer\UAS.cSa]   Drosophila melanogaster
FBal0208992 Vps28[GD7696]   Drosophila melanogaster
FBal0230152 Vps28[D2]   Drosophila melanogaster
FBal0231292 Vps28[KK101474]   Drosophila melanogaster

49 Clones

Secondary Identifier DB identifier
DPiM_GH04443 FBcl0741524
AT04691 FBcl0029901
AT17852 FBcl0029905
EP18409 FBcl0084625
EP02932 FBcl0084627
GH04443 FBcl0129989
GH22221 FBcl0130011
GH07029 FBcl0130013
GH07147 FBcl0130023
GH07624 FBcl0130179
EK183659 FBcl0134580
EK177164 FBcl0134582
EK173913 FBcl0134600
EK194340 FBcl0134602
EK030225 FBcl0134604
RE48208 FBcl0229302
RE50456 FBcl0230403
RH10065 FBcl0267755
RH16205 FBcl0268398
RH40576 FBcl0268407
RH46317 FBcl0268424
RH14138 FBcl0268593
RH53193 FBcl0268594
RH26573 FBcl0268611
RH17333 FBcl0268613
RH22806 FBcl0268615
RH26655 FBcl0268631
SD18422 FBcl0286915
IP15608 FBcl0340749
FGC023E09 FBcl0385853

2 Exons

DB identifier Symbol
FBgn0021814:2 Vps28:2
FBgn0021814:1 Vps28:1

2 Transcripts

DB identifier Gene
FBtr0088825 Vps28
FBtr0310370 Vps28

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0088825-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310370-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088825-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0310370-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
47408 NCBI Entrez Gene identifiers FBgn0021814
70793 BioGRID FBgn0021814

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 845.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 874.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 604.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 840.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1128.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 428.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 907.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 716.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1103.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 960.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1069.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 414.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1307.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 802.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 652.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 682.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 596.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 676.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1066.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 923.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 741.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 798.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1034.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 862.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 902.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 541.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 398.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 528.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 387.0
FBgn0021814 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 339.0

0 Introns

26 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Vps28 none -0.333933659   19067489
Lipid storage Vps28 none 1.851479054   19067489
Intracellular Listeria monocytogenes infection Vps28 Decreased GFP protein expression strong   16020693
Mycobacterial infection (1) - M. fortuitum infection Vps28 Decreased M. fortuitum intracellular infection 3.8 measurement after 3 days 16020694
Cell size and cell-cycle regulation (1) Vps28 none sp   16496002
M. smegmatis infection Vps28 Increased M. smegmatis infection np   18287038
Muscle morphogenesis and function (1) Vps28 Lethal np   20220848
Muscle morphogenesis and function (1) Vps28 Lethal np   20220848
Muscle morphogenesis and function (2) Vps28 Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Heat nociception (1) Vps28 Developmentally lethal 1.41   21074052
Heart development and function (1) Vps28 Embryonic lethal or no offspring 0.5   20371351
Serratia marcescens infection (1) Vps28 Decreased viability after Serratia marcescens infection -1.56578947368421   19520911
Serratia marcescens infection (2) Vps28 none sp   19520911
Serratia marcescens infection (4) Vps28 none sp   19520911
Notch pathway regulation (4) Vps28 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) Vps28 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (1) Vps28 Upregulation of Notch pathway np   20493818
Notch pathway regulation (2) Vps28 Upregulation of Notch pathway; wing disc size: overgrown; wing disc NRE:EGFP: up, broader, ectopic; wing disc myrRFP: accumulation sp en-GAL4 20493818
Notch pathway regulation (3) Vps28 Upregulation of Notch pathway np   20493818
Adiposity regulation (1) Vps28 Decreased triglyceride expression -0.679   20074523
Adiposity regulation (2) Vps28 Lethal or developmental delay d/l   20074523
Adiposity regulation (3) Vps28 Decreased triglyceride expression -0.427   20074523
Adiposity regulation (4) Vps28 Lethal or developmental delay d/l   20074523
Adiposity regulation (5) Vps28 Lethal or developmental delay d/l   20074523
Wnt proteins secretion Vps28 none -1.5   22094269
Hippo pathway regulation Vps28 none 1.26   23263283

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