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Gene : Vps36 D. melanogaster

DB identifier  ? FBgn0086785 Secondary Identifier  ? CG10711
Name  ? Vacuolar protein sorting 36 Source  FlyBase
  • synonyms:
  • FBan0010711,
  • l(3)L5212,
  • Vps36,
  • FBgn0086785,
  • FBgn0036375,
  • FBgn0024559,
  • CG10711,
  • lethal (3) L5212

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10 Alleles

DB identifier Symbol Allele Class Organism
FBal0087016 Vps36[L5212]   Drosophila melanogaster
FBal0197869 Vps36[T:Avic\GFP-YFP.Venus]   Drosophila melanogaster
FBal0197870 Vps36[t3.8]   Drosophila melanogaster
FBal0278857 Vps36[HMS01739]   Drosophila melanogaster
FBal0287138 Vps36[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287139 Vps36[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0187802 Vps36[c04474]   Drosophila melanogaster
FBal0208993 Vps36[GD5901]   Drosophila melanogaster
FBal0222072 Vps36[5-SZ-3498]   Drosophila melanogaster
FBal0231622 Vps36[KK102099]   Drosophila melanogaster

32 Clones

Secondary Identifier DB identifier
AT14989 FBcl0035613
AT10093 FBcl0035849
EK191637 FBcl0052598
GM14474 FBcl0147505
LD27255 FBcl0178147
RE25985 FBcl0236830
RM07548 FBcl0382438
RM08048 FBcl0382434
RM07648 FBcl0382440
RM08148 FBcl0382442
RM07848 FBcl0382444
RM07948 FBcl0382446
CK01.132A.G6 FBcl0447752
FI05802 FBcl0475030
RP001051922 FBcl0678348
RP001011290 FBcl0678349
RP001023756 FBcl0678350
RP001008716 FBcl0678351
RP001035772 FBcl0678352
RP001053162 FBcl0678353
RP001027086 FBcl0678354
RP001002184 FBcl0678355
RP001011686 FBcl0678356
RP001022782 FBcl0678357
RP001051507 FBcl0678358
RP001010602 FBcl0678360
RP001005051 FBcl0678361
RP001000492 FBcl0678363
RP001008802 FBcl0678364
RP001022040 FBcl0678365

3 Exons

DB identifier Symbol
FBgn0086785:3 Vps36:3
FBgn0086785:2 Vps36:2
FBgn0086785:1 Vps36:1

1 Transcripts

DB identifier Gene
FBtr0075818 Vps36

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0075818-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075818-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39523 NCBI Entrez Gene identifiers FBgn0086785
64866 BioGRID FBgn0086785

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 193.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 272.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 223.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 305.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 218.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 317.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 223.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 441.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 280.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 253.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 233.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 218.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 177.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 368.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 151.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 221.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 164.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 202.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 274.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 196.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 263.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 171.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 192.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 253.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 188.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 366.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 164.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 228.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 246.0
FBgn0086785 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 247.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0086785:3_FBgn0086785:2 Drosophila melanogaster
intron_FBgn0086785:2_FBgn0086785:1 Drosophila melanogaster

21 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Vps36 none -1.472456835   19067489
Lipid storage Vps36 none -2.028546916   19067489
ERK signaling Vps36 ERK activation reduced weak   17086199
Cell size and cell-cycle regulation (1) Vps36 Increased G2 DNA content sp   16496002
M. smegmatis infection Vps36 No effect on M. smegmatis infection np   18287038
Muscle morphogenesis and function (1) Vps36 Lethal np   20220848
Muscle morphogenesis and function (1) Vps36 none np   20220848
Heat nociception (1) Vps36 Lethal -0.66   21074052
Heat nociception (1) Vps36 Increased noxious heat avoidance 1.84   21074052
Heart development and function (1) Vps36 none 1   20371351
Heart development and function (1) Vps36 none 1   20371351
Serratia marcescens infection (1) Vps36 none 0.925   19520911
Notch pathway regulation (4) Vps36 Notum malformation migration 1.5   19363474
Notch pathway regulation (4) Vps36 Completely lethal (pupal) sp   19363474
Notch pathway regulation (3) Vps36 Upregulation of Notch pathway np   20493818
Adiposity regulation (1) Vps36 none 0.119   20074523
RTK-Ras-ERK pathway regulation (1) Vps36 none 0.87 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Vps36 none 0.35 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Vps36 none 0.14 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Vps36 none 0.32 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Vps36 none 0.25   23263283

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