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Gene : CG5888 D. melanogaster

DB identifier  ? FBgn0028523 Secondary Identifier  ? CG5888
Source  FlyBase
  • synonyms:
  • FBgn0028523,
  • BG:DS02780.1,
  • CT18477,
  • FBan0005888

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7 Alleles

DB identifier Symbol Allele Class Organism
FBal0161223 CG5888[f07042]   Drosophila melanogaster
FBal0161224 CG5888[e02257]   Drosophila melanogaster
FBal0192781 CG5888[MB00188]   Drosophila melanogaster
FBal0192837 CG5888[MB01297]   Drosophila melanogaster
FBal0136140 CG5888[Roi-1]   Drosophila melanogaster
FBal0218840 CG5888[MB09289]   Drosophila melanogaster
FBal0204864 CG5888[GD5404]   Drosophila melanogaster

113 Clones

Secondary Identifier DB identifier
ESG019c.E21_C05 FBcl0000634
CK01518 FBcl0060499
EK139627 FBcl0099312
EK126249 FBcl0099322
EK273745 FBcl0099332
EK015533 FBcl0099342
EK068836 FBcl0099352
EK141721 FBcl0099412
EK142316 FBcl0099666
EK304012 FBcl0099982
EK072964 FBcl0100020
EK222844 FBcl0100050
EK192011 FBcl0100056
EK116050 FBcl0100066
EK133305 FBcl0100086
EK222221 FBcl0100148
EN08433 FBcl0101265
GH08155 FBcl0121905
RE74052 FBcl0218396
RE71049 FBcl0218674
RE73642 FBcl0218702
RE32157 FBcl0218706
RE34972 FBcl0218722
RE60085 FBcl0218724
RE18460 FBcl0218727
RE38129 FBcl0218729
RE30192 FBcl0218738
RE49880 FBcl0218744
RE26406 FBcl0218747
31998 FBcl0430765

5 Exons

DB identifier Symbol
FBgn0028523:5 CG5888:5
FBgn0028523:3 CG5888:3
FBgn0028523:2 CG5888:2
FBgn0028523:1 CG5888:1
FBgn0028523:4 CG5888:4

2 Transcripts

DB identifier Gene
FBtr0080880 CG5888
FBtr0340234 CG5888

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0080880-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340234-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0080880-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340234-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34980 NCBI Entrez Gene identifiers FBgn0028523
60989 BioGRID FBgn0028523

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 806.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1194.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 496.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1812.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1806.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1058.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 824.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 512.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 445.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1031.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1415.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2373.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1140.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 334.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 139.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 575.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 522.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 78.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 604.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 652.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 101.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 753.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 425.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 951.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 116.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 211.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1632.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2173.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1504.0
FBgn0028523 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 889.0

4 Introns

DB identifier
Organism . Name
intron_FBgn0028523:5_FBgn0028523:3 Drosophila melanogaster
intron_FBgn0028523:3_FBgn0028523:2 Drosophila melanogaster
intron_FBgn0028523:2_FBgn0028523:1 Drosophila melanogaster
intron_FBgn0028523:4_FBgn0028523:2 Drosophila melanogaster

10 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG5888 none -2.446840745   19067489
Lipid storage CG5888 none -0.107790312   19067489
Cell size and cell-cycle regulation (1) CG5888 none sp   16496002
Muscle morphogenesis and function (1) CG5888 none np   20220848
Heat nociception (1) CG5888 none -1.17   21074052
Serratia marcescens infection (1) CG5888 none -0.34313725490196   19520911
Notch pathway regulation (4) CG5888 none 0   19363474
PGN-induced dJNK phosphorylation CG5888 Increased P-JNK protein expression with PGN 2.22 60 min PGN induction 19893628
Adiposity regulation (1) CG5888 none -0.023   20074523
Hippo pathway regulation CG5888 none 1.1   23263283

0 Submissions