modENCODE |  Help |  blog

Gene : CG1607 D. melanogaster
DB identifier  ? FBgn0039844 Secondary Identifier  ? CG1607
Source  FlyBase
  • synonyms:
  • CG1607,
  • FBan0001607,
  • FBgn0039844
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

9 Alleles

DB identifier Symbol Allele Class Organism
FBal0187025 CG1607[f03043]   Drosophila melanogaster
FBal0187027 CG1607[c05645]   Drosophila melanogaster
FBal0187026 CG1607[c05674]   Drosophila melanogaster
FBal0162119 CG1607[e00971]   Drosophila melanogaster
FBal0192895 CG1607[MB01239]   Drosophila melanogaster
FBal0201564 CG1607[GD4651]   Drosophila melanogaster
FBal0265507 CG1607[MI04390]   Drosophila melanogaster
FBal0234891 CG1607[KK107364]   Drosophila melanogaster
FBal0272355 CG1607[NIG.1607R]   Drosophila melanogaster

100 Clones

Secondary Identifier DB identifier
EK136748 FBcl0002052
EK267633 FBcl0005142
EK188501 FBcl0005342
EK164557 FBcl0005454
ESG012a.E21_B02 FBcl0012237
EP13603 FBcl0087395
EP02239 FBcl0087417
GH09282 FBcl0119997
GH19295 FBcl0119999
GH27380 FBcl0120075
EK163047 FBcl0139136
EK207831 FBcl0139206
EK021564 FBcl0139208
EK141029 FBcl0139634
EK160624 FBcl0139650
EK282038 FBcl0139684
EK113839 FBcl0140130
EK266728 FBcl0140138
EK227723 FBcl0140994
RE25888 FBcl0216338
RE10768 FBcl0216342
RE14074 FBcl0216343
RE70527 FBcl0216396
RE69129 FBcl0216399
RE66217 FBcl0216403
RE41855 FBcl0216408
RE21415 FBcl0216418
RE09057 FBcl0216422
RE07920 FBcl0216423
RE02536 FBcl0216430

11 Exons

DB identifier Symbol
FBgn0039844:1 CG1607:1
FBgn0039844:3 CG1607:3
FBgn0039844:4 CG1607:4
FBgn0039844:5 CG1607:5
FBgn0039844:6 CG1607:6
FBgn0039844:7 CG1607:7
FBgn0039844:8 CG1607:8
FBgn0039844:9 CG1607:9
FBgn0039844:10 CG1607:10
FBgn0039844:11 CG1607:11
FBgn0039844:2 CG1607:2

4 Transcripts

DB identifier Gene
FBtr0334550 CG1607
FBtr0085785 CG1607
FBtr0334549 CG1607
FBtr0085786 CG1607

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085785-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085786-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334549-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334550-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085785-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085786-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334549-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334550-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

8 Pathways

1 Cross References

Identifier
Source . Name
Subject . Primary Identifier
43707 NCBI Entrez Gene identifiers FBgn0039844

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 68.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 91.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 284.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 90.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 267.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 178.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 56.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 352.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 112.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 534.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 54.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 144.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 138.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 140.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 56.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 215.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 80.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 106.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 69.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 102.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 81.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 134.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 220.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 74.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2308.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 209.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 206.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 122.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 105.0
FBgn0039844 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 198.0

11 Introns

DB identifier
Organism . Name
intron_FBgn0039844:1_FBgn0039844:3 Drosophila melanogaster
intron_FBgn0039844:3_FBgn0039844:4 Drosophila melanogaster
intron_FBgn0039844:4_FBgn0039844:5 Drosophila melanogaster
intron_FBgn0039844:5_FBgn0039844:6 Drosophila melanogaster
intron_FBgn0039844:6_FBgn0039844:7 Drosophila melanogaster
intron_FBgn0039844:7_FBgn0039844:8 Drosophila melanogaster
intron_FBgn0039844:8_FBgn0039844:9 Drosophila melanogaster
intron_FBgn0039844:9_FBgn0039844:11 Drosophila melanogaster
intron_FBgn0039844:2_FBgn0039844:3 Drosophila melanogaster
intron_FBgn0039844:9_FBgn0039844:10 Drosophila melanogaster
intron_FBgn0039844:10_FBgn0039844:11 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG1607 none -0.642911549   19067489
Lipid storage CG1607 none 0   19067489
Cell size and cell-cycle regulation (1) CG1607 none sp   16496002
Muscle morphogenesis and function (1) CG1607 none np   20220848
Muscle morphogenesis and function (1) CG1607 none np   20220848
Heat nociception (1) CG1607 none -1.17   21074052
Heat nociception (1) CG1607 none -0.26   21074052
Heart development and function (1) CG1607 none 1   20371351
Serratia marcescens infection (1) CG1607 none 0.666666666666666   19520911
Notch pathway regulation (4) CG1607 Colour defects, bristle morphology defects, notum malformation death sp   19363474
Notch pathway regulation (4) CG1607 none 0   19363474
Blood cell homeostasis regulation (1) CG1607 none np   20540764
Blood cell homeostasis regulation (2) CG1607 none np   20540764
Hippo pathway regulation CG1607 none -0.09   23263283
Glycosylation regulation (1) CG1607 Increased GlcNAcb1-4GlcNAc Chp glycosylation sp   21203496
Glycosylation regulation (2) CG1607 none np   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom