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Gene : mod(r) D. melanogaster

DB identifier  ? FBgn0016038 Secondary Identifier  ? CG17828
Name  ? modifier of rudimentary Source  FlyBase
  • synonyms:
  • FBgn0016038,
  • mod(r),
  • FBgn0045872,
  • FBan0017828,
  • anon-WO0153538.78,
  • vps37A,
  • CG17828,
  • EG:115C2.5,
  • FBgn0025636,
  • Vps37

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Genomics

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8 Alleles

DB identifier Symbol Allele Class Organism
FBal0046121 mod(r)[p1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0147007 mod(r)[KG07005]   Drosophila melanogaster
FBal0278884 mod(r)[HMS01766]   Drosophila melanogaster
FBal0210094 mod(r)[GD8613]   Drosophila melanogaster
FBal0216932 mod(r)[p2]   Drosophila melanogaster
FBal0216933 mod(r)[CB-0688-3]   Drosophila melanogaster
FBal0223099 mod(r)[GG01672]   Drosophila melanogaster
FBal0236521 mod(r)[KK109860]   Drosophila melanogaster

45 Clones

Secondary Identifier DB identifier
EK054913 FBcl0019254
AT10251 FBcl0024441
AT04392 FBcl0024443
AT03092 FBcl0024445
EK200256 FBcl0025824
EK282237 FBcl0027574
CK02153 FBcl0059829
CK00438 FBcl0059831
GH09863 FBcl0127397
GH28632 FBcl0127403
GH04984 FBcl0127415
EK110332 FBcl0138532
EK247306 FBcl0138790
EK102723 FBcl0140760
EK236704 FBcl0141286
EK044807 FBcl0141388
EK113609 FBcl0141566
LP01383 FBcl0188229
RE69619 FBcl0226346
SD11576 FBcl0284776
SD12213 FBcl0284780
RP004283186 FBcl0485684
RP004237698 FBcl0485665
RP004258638 FBcl0485666
RP004437768 FBcl0485667
RP004538947 FBcl0485668
RP004388587 FBcl0485669
RP004413720 FBcl0485670
RP004543334 FBcl0485672
RP004528404 FBcl0485674

9 Exons

DB identifier Symbol
FBgn0016038:2 mod(r):2
FBgn0016038:4 mod(r):4
FBgn0016038:7 mod(r):7
FBgn0016038:8 mod(r):8
FBgn0016038:3 mod(r):3
FBgn0016038:9 mod(r):9
FBgn0016038:5 mod(r):5
FBgn0016038:1 mod(r):1
FBgn0016038:6 mod(r):6

6 Transcripts

DB identifier Gene
FBtr0089726 mod(r)
FBtr0335123 mod(r)
FBtr0089724 mod(r)
FBtr0089725 mod(r)
FBtr0335122 mod(r)
FBtr0089723 mod(r)

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089726-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089723-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089724-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089725-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335122-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335123-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089726-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089723-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089724-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089725-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335122-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335123-3-prime-utr Drosophila melanogaster

Interactions

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Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
31006 NCBI Entrez Gene identifiers FBgn0016038
57575 BioGRID FBgn0016038

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1017.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 962.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1132.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1542.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 898.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 973.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1047.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 604.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 574.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 983.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1385.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 508.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1119.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 550.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1177.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 584.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1058.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 644.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1403.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 937.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 872.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 862.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 855.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 627.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 869.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2173.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 576.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 369.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 396.0
FBgn0016038 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 490.0

10 Introns

DB identifier
Organism . Name
intron_FBgn0016038:2_FBgn0016038:4 Drosophila melanogaster
intron_FBgn0016038:4_FBgn0016038:7 Drosophila melanogaster
intron_FBgn0016038:7_FBgn0016038:8 Drosophila melanogaster
intron_FBgn0016038:3_FBgn0016038:7 Drosophila melanogaster
intron_FBgn0016038:7_FBgn0016038:9 Drosophila melanogaster
intron_FBgn0016038:2_FBgn0016038:6 Drosophila melanogaster
intron_FBgn0016038:6_FBgn0016038:7 Drosophila melanogaster
intron_FBgn0016038:2_FBgn0016038:5 Drosophila melanogaster
intron_FBgn0016038:5_FBgn0016038:7 Drosophila melanogaster
intron_FBgn0016038:1_FBgn0016038:4 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage mod(r) none 0.643296304   19067489
Lipid storage mod(r) none -0.069780458   19067489
ERK signaling mod(r) ERK activation increased weak   17086199
Cell size and cell-cycle regulation (1) mod(r) none sp   16496002
Muscle morphogenesis and function (1) mod(r) none np   20220848
Muscle morphogenesis and function (1) mod(r) none np   20220848
Heat nociception (1) mod(r) none -1.17   21074052
Heart development and function (1) mod(r) none 1   20371351
Heart development and function (1) mod(r) none 1   20371351
Serratia marcescens infection (1) mod(r) none -0.046875   19520911
Notch pathway regulation (4) mod(r) none 0   19363474
Notch pathway regulation (4) mod(r) none 0   19363474
Notch pathway regulation (1) mod(r) Upregulation of Notch pathway np   20493818
Notch pathway regulation (3) mod(r) none np   20493818
Adiposity regulation (1) mod(r) none 0.181   20074523
RTK-Ras-ERK pathway regulation (1) mod(r) none -0.11 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) mod(r) none -0.49 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) mod(r) none -0.38 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) mod(r) none 0.03 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation mod(r) none 0.5   23263283

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