modENCODE |  Help |  blog

Gene : CG8398 D. melanogaster
DB identifier  ? FBgn0035708 Secondary Identifier  ? CG8398
Source  FlyBase
  • synonyms:
  • FBgn0035708,
  • FBan0008398,
  • FBgn0027687,
  • CG8398,
  • anon-EST:Posey31
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

2 Alleles

DB identifier Symbol Allele Class Organism
FBal0160924 CG8398[GT-000966]   Drosophila melanogaster
FBal0205858 CG8398[GD13915]   Drosophila melanogaster

40 Clones

Secondary Identifier DB identifier
AF171771 FBcl0000261
AT17963 FBcl0024631
AT14362 FBcl0024633
AT14008 FBcl0024635
AT15548 FBcl0024637
AT28728 FBcl0024639
AT01390 FBcl0024641
AT28185 FBcl0024645
AT09139 FBcl0024647
AT21853 FBcl0024651
AT16764 FBcl0024653
AT28343 FBcl0024655
bs70g11 FBcl0052327
EP11313 FBcl0082313
EP12246 FBcl0082317
EK207949 FBcl0114552
EK097334 FBcl0114598
LP02842 FBcl0182187
RE58478 FBcl0201954
RE58489 FBcl0201986
RE41454 FBcl0201989
RE44072 FBcl0201994
RE35192 FBcl0202020
AT21463 FBcl0349490
AT18546 FBcl0349491
AT19046 FBcl0349492
AT19047 FBcl0349493
AT19048 FBcl0349494
AT19060 FBcl0349495
FI12113 FBcl0718722

8 Exons

DB identifier Symbol
FBgn0035708:4 CG8398:4
FBgn0035708:5 CG8398:5
FBgn0035708:6 CG8398:6
FBgn0035708:7 CG8398:7
FBgn0035708:1 CG8398:1
FBgn0035708:8 CG8398:8
FBgn0035708:3 CG8398:3
FBgn0035708:2 CG8398:2

4 Transcripts

DB identifier Gene
FBtr0076981 CG8398
FBtr0330184 CG8398
FBtr0076978 CG8398
FBtr0076980 CG8398

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076978-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076980-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076981-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330184-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076978-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076980-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076981-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330184-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
38741 NCBI Entrez Gene identifiers FBgn0035708
64191 BioGRID FBgn0035708

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 322.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 314.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 28.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 353.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 383.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 78.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 162.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1203.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 168.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 146.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 135.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 86.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 557.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 85.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 823.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 66.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 128.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1027.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 67.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 450.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 501.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 250.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 84.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 876.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 87.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 81.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 128.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 324.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 858.0
FBgn0035708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 754.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0035708:2_FBgn0035708:5 Drosophila melanogaster
intron_FBgn0035708:5_FBgn0035708:6 Drosophila melanogaster
intron_FBgn0035708:6_FBgn0035708:7 Drosophila melanogaster
intron_FBgn0035708:4_FBgn0035708:5 Drosophila melanogaster
intron_FBgn0035708:1_FBgn0035708:5 Drosophila melanogaster
intron_FBgn0035708:6_FBgn0035708:8 Drosophila melanogaster
intron_FBgn0035708:3_FBgn0035708:5 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG8398 none -1.237441736   19067489
Lipid storage CG8398 none 1.904090904   19067489
Lipid storage CG8398 none 2.412075904   19067489
Lipid storage CG8398 none 1.654051915   19067489
Cell size and cell-cycle regulation (1) CG8398 none sp   16496002
Muscle morphogenesis and function (1) CG8398 none np   20220848
Muscle morphogenesis and function (1) CG8398 none np   20220848
Heat nociception (1) CG8398 none -1.17   21074052
Serratia marcescens infection (1) CG8398 none 0.382716049382716   19520911
Notch pathway regulation (4) CG8398 none 0   19363474
Notch pathway regulation (4) CG8398 none 0   19363474
Adiposity regulation (1) CG8398 none -0.188   20074523
Hippo pathway regulation CG8398 none 0.45   23263283

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom