modENCODE |  Help |  blog

Gene : Prat D. melanogaster

DB identifier  ? FBgn0004901 Secondary Identifier  ? CG2867
Name  ? Phosphoribosylamidotransferase Source  FlyBase
  • synonyms:
  • FBgn0004901,
  • DmPrat,
  • CG2867,
  • transcript D,
  • FBan0002867,
  • Prat

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

15 Alleles

DB identifier Symbol Allele Class Organism
FBal0282558 Prat[Scer\UAS.cPa]   Drosophila melanogaster
FBal0281671 Prat[HMS02669]   Drosophila melanogaster
FBal0182151 Prat[d01596]   Drosophila melanogaster
FBal0156048 Prat[BG02432]   Drosophila melanogaster
FBal0038965 Prat[48A53]   Drosophila melanogaster
FBal0038966 Prat[49A74]   Drosophila melanogaster
FBal0038964 Prat[16A6]   Drosophila melanogaster
FBal0038963 Prat[12A19]   Drosophila melanogaster
FBal0038967 Prat[62B104]   Drosophila melanogaster
FBal0262811 Prat[GL00345]   Drosophila melanogaster
FBal0193128 Prat[dsRNA.IR-AS.Scer\UAS]   Drosophila melanogaster
FBal0193129 Prat[dsRNA.IR-SA.Scer\UAS]   Drosophila melanogaster
FBal0208121 Prat[GD9838]   Drosophila melanogaster
FBal0222049 Prat[5-HA-1933]   Drosophila melanogaster
FBal0273210 Prat[NIG.2867R]   Drosophila melanogaster

22 Clones

Secondary Identifier DB identifier
EK159423 FBcl0012166
EK050454 FBcl0012912
EK175021 FBcl0012934
EK163901 FBcl0013244
CK00252 FBcl0060677
EP02330 FBcl0090093
EN16313 FBcl0102201
GM03126 FBcl0143816
LD13257 FBcl0152958
LD42113 FBcl0165749
LP23079 FBcl0181753
RE53924 FBcl0198498
RH72022 FBcl0246909
RH58660 FBcl0247188
SD23956 FBcl0292332
SD06501 FBcl0292333
SD08013 FBcl0292334
IP06544 FBcl0319656
IP06444 FBcl0319657
FGB001A01 FBcl0384635
FGM312D11 FBcl0392984
DPiM_LD42113 FBcl0739042

3 Exons

DB identifier Symbol
FBgn0004901:3 Prat:3
FBgn0004901:1 Prat:1
FBgn0004901:2 Prat:2

2 Transcripts

DB identifier Gene
FBtr0304705 Prat
FBtr0081764 Prat

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0081764-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0304705-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0081764-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0304705-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
40935 NCBI Entrez Gene identifiers FBgn0004901

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 596.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 742.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 378.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 473.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 390.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 484.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 627.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 690.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 288.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 527.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 480.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 320.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 706.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 337.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 304.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 454.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 356.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 350.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 613.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 317.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 384.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 530.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 414.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 346.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 251.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1146.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 113.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 444.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 641.0
FBgn0004901 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 649.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0004901:3_FBgn0004901:2 Drosophila melanogaster
intron_FBgn0004901:3_FBgn0004901:1 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Prat none 1.974134221   19067489
Lipid storage Prat none -0.075288576   19067489
Cell size and cell-cycle regulation (1) Prat none sp   16496002
Muscle morphogenesis and function (1) Prat none np   20220848
Muscle morphogenesis and function (1) Prat none np   20220848
Heat nociception (1) Prat none -1.17   21074052
Heart development and function (1) Prat none 1   20371351
Serratia marcescens infection (1) Prat none -0.514285714285714   19520911
Notch pathway regulation (4) Prat none 0   19363474
Adiposity regulation (1) Prat Decreased triglyceride expression -0.665   20074523
Adiposity regulation (2) Prat none 0.136   20074523
Adiposity regulation (3) Prat none 0.133   20074523
Adiposity regulation (4) Prat none -0.174   20074523
Adiposity regulation (5) Prat none 0.05   20074523
Glycosylation regulation (1) Prat none sp   21203496

0 Submissions