modENCODE |  Help |  blog

Gene : vis D. melanogaster

DB identifier  ? FBgn0033748 Secondary Identifier  ? CG8821
Name  ? vismay Source  FlyBase
  • synonyms:
  • zuker-aly-like a,
  • Vismay,
  • dTGIFa,
  • CG8821,
  • FBgn0033748,
  • achi/vis,
  • TGIFa,
  • FBan0008821,
  • zaa,
  • vis,
  • FBgn0026155

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

8 Alleles

DB identifier Symbol Allele Class Organism
FBal0238910 vis[G2720]   Drosophila melanogaster
FBal0283478 vis[MI07740]   Drosophila melanogaster
FBal0242140 vis[JF02406]   Drosophila melanogaster
FBal0150173 vis[+t4.7]   Drosophila melanogaster
FBal0150172 vis[Z3922]   Drosophila melanogaster
FBal0150171 vis[achi-1]   Drosophila melanogaster
FBal0263388 vis[HMS01480]   Drosophila melanogaster
FBal0210862 vis[GD17540]   Drosophila melanogaster

6 Clones

Secondary Identifier DB identifier
DPiM_SD01238 FBcl0741326
bs61b11 FBcl0051849
RE30881 FBcl0234137
SD01238 FBcl0283950
SD08875 FBcl0283957
DPiM_RE30881 FBcl0739719

9 Exons

DB identifier Symbol
FBgn0033748:9 vis:9
FBgn0033748:7 vis:7
FBgn0033748:6 vis:6
FBgn0033748:4 vis:4
FBgn0033748:3 vis:3
FBgn0033748:2 vis:2
FBgn0033748:1 vis:1
FBgn0033748:5 vis:5
FBgn0033748:8 vis:8

2 Transcripts

DB identifier Gene
FBtr0087944 vis
FBtr0087945 vis

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0087944-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0087945-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0087944-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0087945-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
36372 NCBI Entrez Gene identifiers FBgn0033748
62146 BioGRID FBgn0033748

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 229.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 169.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 351.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 228.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 618.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1260.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 838.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 227.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 207.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 591.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 256.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 265.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 165.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 427.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 386.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 232.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 320.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 472.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 253.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 153.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 307.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 175.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 457.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 358.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 984.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 296.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 190.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 143.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 200.0
FBgn0033748 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 156.0

10 Introns

DB identifier
Organism . Name
intron_FBgn0033748:9_FBgn0033748:7 Drosophila melanogaster
intron_FBgn0033748:7_FBgn0033748:6 Drosophila melanogaster
intron_FBgn0033748:6_FBgn0033748:4 Drosophila melanogaster
intron_FBgn0033748:4_FBgn0033748:3 Drosophila melanogaster
intron_FBgn0033748:3_FBgn0033748:2 Drosophila melanogaster
intron_FBgn0033748:2_FBgn0033748:1 Drosophila melanogaster
intron_FBgn0033748:9_FBgn0033748:8 Drosophila melanogaster
intron_FBgn0033748:8_FBgn0033748:6 Drosophila melanogaster
intron_FBgn0033748:6_FBgn0033748:5 Drosophila melanogaster
intron_FBgn0033748:5_FBgn0033748:4 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Cell size and cell-cycle regulation (1) vis none sp   16496002
Cell size and cell-cycle regulation (1) vis none sp   16496002
Dendrite pattern formation vis none np   16547170
Muscle morphogenesis and function (1) vis none np   20220848
Muscle morphogenesis and function (1) vis none np   20220848
Muscle morphogenesis and function (1) vis Semi-lethal np   20220848
Heat nociception (1) vis none -0.26   21074052
Heart development and function (1) vis none 1   20371351
Serratia marcescens infection (1) vis none 0.288461538461538   19520911
Serratia marcescens infection (1) vis none 0.777777777777777   19520911
Notch pathway regulation (4) vis Hair cell duplication, notum malformation death sp   19363474
Notch pathway regulation (4) vis Hair cell duplication, bristle morphology defects sp   19363474
Adiposity regulation (1) vis none -0.047   20074523
Adiposity regulation (1) vis none 0.12   20074523
Hippo pathway regulation vis none 0.03   23263283
Glycosylation regulation (1) vis none sp   21203496

0 Submissions