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Gene : ptc D. melanogaster

DB identifier  ? FBgn0003892 Secondary Identifier  ? CG2411
Name  ? patched Source  FlyBase
  • synonyms:
  • rubberneck,
  • tuf,
  • FBan0002411,
  • FBgn0013766,
  • Ptc_Dm,
  • tufted,
  • rubr,
  • pat,
  • FBgn0064818,
  • l(2)k02507,
  • compaction defects 4,
  • Patched,
  • PTC,
  • FBgn0015537,
  • com4,
  • BcDNA:RH36596,
  • FBgn0003892,
  • Ptch,
  • Conf,
  • CG2411,
  • dPtc,
  • Confused,
  • patch

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191 Alleles

DB identifier Symbol Allele Class Organism
FBal0280220 ptc[B.2.13]   Drosophila melanogaster
FBal0283563 ptc[Scer\UAS.T:Avic\GFP-YFP.cIa]   Drosophila melanogaster
FBal0280600 ptc[CTD.Scer\UAS.T:Hsap\LDLR]   Drosophila melanogaster
FBal0280601 ptc[AAAA.Scer\UAS]   Drosophila melanogaster
FBal0280602 ptc[RpL32.T:Avic\GFP]   Drosophila melanogaster
FBal0280603 ptc[Delta2.RpL32.T:Avic\GFP]   Drosophila melanogaster
FBal0280604 ptc[AAAA.RpL32.T:Avic\GFP]   Drosophila melanogaster
FBal0264049 ptc[NIG.2411R]   Drosophila melanogaster
FBal0212002 ptc[CB02030]   Drosophila melanogaster
FBal0280605 ptc[Delta2.alphaTub84B.T:Avic\GFP]   Drosophila melanogaster
FBal0280606 ptc[Delta2.Scer\FRT.alphaTub84B.T:Avic\GFP]   Drosophila melanogaster
FBal0280607 ptc[14.alphaTub84B.T:Avic\GFP]   Drosophila melanogaster
FBal0178357 ptc[d04288]   Drosophila melanogaster
FBal0215576 ptc[Deltaloop2.Scer\UAS]   Drosophila melanogaster
FBal0178355 ptc[d06878]   Drosophila melanogaster
FBal0178356 ptc[d06848]   Drosophila melanogaster
FBal0138169 ptc[559.1] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0035473 ptc[H84] amorphic allele - genetic evidence Drosophila melanogaster
FBal0044325 ptc[k02507]   Drosophila melanogaster
FBal0050313 ptc[k09829] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0056276 ptc[02465]   Drosophila melanogaster
FBal0088689 ptc[EP941]   Drosophila melanogaster
FBal0063793 ptc[rH081]   Drosophila melanogaster
FBal0063794 ptc[rH075]   Drosophila melanogaster
FBal0260772 ptc[31.06]   Drosophila melanogaster
FBal0260773 ptc[7.10]   Drosophila melanogaster
FBal0046326 ptc[H3]   Drosophila melanogaster
FBal0095238 ptc[10613]   Drosophila melanogaster
FBal0095239 ptc[10475]   Drosophila melanogaster
FBal0096721 ptc[H40]   Drosophila melanogaster

55 Clones

Secondary Identifier DB identifier
EP15102 FBcl0084401
EP09531 FBcl0084437
EP15203 FBcl0084441
EK112319 FBcl0134072
EK199044 FBcl0134110
EK157409 FBcl0134152
EK190803 FBcl0134178
EK278333 FBcl0134180
EK274529 FBcl0134212
EK292152 FBcl0134244
EK045617 FBcl0134284
RH22144 FBcl0266320
RH26220 FBcl0266405
RH22848 FBcl0266470
RH36596 FBcl0266498
RH29101 FBcl0266507
RH23555 FBcl0266528
RH30310 FBcl0266546
RH22422 FBcl0266552
RH21529 FBcl0266557
RH23190 FBcl0266561
RH31043 FBcl0266566
RH56332 FBcl0266569
RH27709 FBcl0266575
RH25802 FBcl0266580
RH28091 FBcl0266658
RH24620 FBcl0266736
SD20652 FBcl0286821
Batuco_16_A05 FBcl0394084
Elena_26_C05 FBcl0394275

6 Exons

DB identifier Symbol
FBgn0003892:1 ptc:1
FBgn0003892:2 ptc:2
FBgn0003892:3 ptc:3
FBgn0003892:4 ptc:4
FBgn0003892:5 ptc:5
FBgn0003892:6 ptc:6

1 Transcripts

DB identifier Gene
FBtr0089427 ptc

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089427-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089427-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
35851 NCBI Entrez Gene identifiers FBgn0003892
61701 BioGRID FBgn0003892

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 494.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 270.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 288.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 225.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 113.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 257.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 61.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 651.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1105.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 106.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 792.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 496.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 225.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 420.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 443.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2715.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1008.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 86.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 393.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 565.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1537.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 647.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 230.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 572.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 254.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 389.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 3497.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3725.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2890.0
FBgn0003892 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 3446.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0003892:1_FBgn0003892:2 Drosophila melanogaster
intron_FBgn0003892:2_FBgn0003892:3 Drosophila melanogaster
intron_FBgn0003892:3_FBgn0003892:4 Drosophila melanogaster
intron_FBgn0003892:4_FBgn0003892:5 Drosophila melanogaster
intron_FBgn0003892:5_FBgn0003892:6 Drosophila melanogaster

16 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage ptc none -0.007146469   19067489
Lipid storage ptc none 0.724422322   19067489
Lipid storage ptc none -2.706004526   19067489
Lipid storage ptc none -0.371072308   19067489
Hedgehog signaling ptc Increased Hedgehog reporter activity 3.31   16311596
Hedgehog signaling ptc Increased Hedgehog reporter activity 4.84   16311596
Embryonic nervous system development ptc Defects in nervous system development np   15534205
Hh pathway regulation ptc none -0.000619425109972968   17903264
Hh pathway regulation ptc none 0.29686013621166   17903264
Blood cell homeostasis regulation (1) ptc none np   20540764
Blood cell homeostasis regulation (2) ptc Increased melanotic mass formation np   20540764
Blood cell homeostasis regulation (3) ptc none 1.8   20540764
Blood cell homeostasis regulation (4) ptc none 0   20540764
Blood cell homeostasis regulation (5) ptc none 4.3   20540764
Hippo pathway regulation ptc none -2.45   23263283
Glycosylation regulation (1) ptc none sp   21203496

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