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Gene : shrb D. melanogaster

DB identifier  ? FBgn0086656 Secondary Identifier  ? CG8055
Name  ? shrub Source  FlyBase
  • synonyms:
  • CG8055,
  • ESCRT-III,
  • Shrb,
  • Snf7/Vps32,
  • DmSNF2,
  • Snf7,
  • vps32/snf7,
  • FBgn0062188,
  • anon-WO0118547.180,
  • Vps32,
  • FBgn0086656,
  • FBgn0028565,
  • FBan0008055,
  • FBgn0033385,
  • shrub

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15 Alleles

DB identifier Symbol Allele Class Organism
FBal0269117 shrb[Scer\UAS.T:Hsap\MYC]   Drosophila melanogaster
FBal0230478 shrb[O3]   Drosophila melanogaster
FBal0184886 shrb[d02738]   Drosophila melanogaster
FBal0137590 shrb[KG01481]   Drosophila melanogaster
FBal0196635 shrb[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0160962 shrb[EY05194]   Drosophila melanogaster
FBal0064183 shrb[k11201]   Drosophila melanogaster
FBal0196634 shrb[Scer\UAS.cSa]   Drosophila melanogaster
FBal0196636 shrb[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0102405 shrb[4]   Drosophila melanogaster
FBal0278885 shrb[HMS01767]   Drosophila melanogaster
FBal0267826 shrb[SH2106]   Drosophila melanogaster
FBal0215124 shrb[GD10619]   Drosophila melanogaster
FBal0230153 shrb[G5]   Drosophila melanogaster
FBal0235648 shrb[KK108557]   Drosophila melanogaster

66 Clones

Secondary Identifier DB identifier
DPiM_GH13992 FBcl0741418
ESG018d.E21_B07 FBcl0000046
UUGC0931 FBcl0005131
ESG011a.E7.3_C06 FBcl0012957
EC37624 FBcl0072065
EN16221 FBcl0101067
EN00959 FBcl0101069
EN14922 FBcl0101071
EN16222 FBcl0101073
EN17154 FBcl0101075
EN17735 FBcl0101077
GH06167 FBcl0130209
GH13992 FBcl0130375
EK061649 FBcl0133012
EK250939 FBcl0133030
EK292622 FBcl0133032
EK238607 FBcl0133038
EK244420 FBcl0133040
LD08047 FBcl0160821
LD31593 FBcl0176301
LP17081 FBcl0189401
RE20780 FBcl0230373
RE33661 FBcl0230415
RE19739 FBcl0230596
RE37852 FBcl0230689
RE22443 FBcl0230857
RH09087 FBcl0268596
RH57272 FBcl0268599
RH13132 FBcl0268603
RH04819 FBcl0268619

4 Exons

DB identifier Symbol
FBgn0086656:4 shrb:4
FBgn0086656:3 shrb:3
FBgn0086656:2 shrb:2
FBgn0086656:1 shrb:1

1 Transcripts

DB identifier Gene
FBtr0088623 shrb

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0088623-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088623-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
35933 NCBI Entrez Gene identifiers FBgn0086656
61771 BioGRID FBgn0086656

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2382.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2848.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1376.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1803.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2563.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1913.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 4777.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2715.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1883.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3067.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 3128.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1484.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3352.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1779.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 3337.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2679.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 3942.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 3026.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2908.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2521.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2594.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 4222.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2292.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2839.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2402.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2880.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1411.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1368.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1533.0
FBgn0086656 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1899.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0086656:4_FBgn0086656:3 Drosophila melanogaster
intron_FBgn0086656:3_FBgn0086656:2 Drosophila melanogaster
intron_FBgn0086656:2_FBgn0086656:1 Drosophila melanogaster

19 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage shrb none 0.104713936   19067489
Lipid storage shrb none -0.86765686   19067489
ERK signaling shrb ERK activation reduced weak   17086199
Intracellular Listeria monocytogenes infection shrb Decreased GFP protein expression strong   16020693
L. monocytogenes infection shrb Fewer infected cells, less vacuolar escape, fewer bacteria per cell ***   16157870
L. monocytogenes infection shrb Escape pff LLO- strain ****   16157870
Mycobacterial infection (1) - M. fortuitum infection shrb Decreased M. fortuitum intracellular infection 9.1 measurement after 3 days 16020694
Mycobacterial infection (2) - E. coli phagocytosis shrb Decreased E. coli phagocytosis np   16020694
Constitutive protein secretion and Golgi organization (1) shrb Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) shrb none sp   16496002
M. smegmatis infection shrb Increased M. smegmatis infection np   18287038
Lipid storage shrb Smaller sized lipid droplets, more dispersed strong   18408709
Notch pathway regulation (1) shrb Upregulation of Notch pathway np   20493818
RTK-Ras-ERK pathway regulation (1) shrb none 0.89 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) shrb none -1.35 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shrb none -1.5 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shrb none -0.86 10 minutes sSpitz stimulation 22028469
Wnt proteins secretion shrb none 0   22094269
Hippo pathway regulation shrb none -0.96   23263283

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