modENCODE |  Help |  blog

Gene : CG2807 D. melanogaster
DB identifier  ? FBgn0031266 Secondary Identifier  ? CG2807
Source  FlyBase
  • synonyms:
  • SF3B,
  • CG2807,
  • unnamed,
  • FBgn0031266,
  • FBan0002807,
  • anon-21Cd,
  • FBgn0025944
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

8 Alleles

DB identifier Symbol Allele Class Organism
FBal0257091 CG2807[HMS00055]   Drosophila melanogaster
FBal0240305 CG2807[HM05176]   Drosophila melanogaster
FBal0157106 CG2807[k13714]   Drosophila melanogaster
FBal0259004 CG2807[KK101690]   Drosophila melanogaster
FBal0094585 CG2807[tRa]   Drosophila melanogaster
FBal0094586 CG2807[Delta8]   Drosophila melanogaster
FBal0202353 CG2807[GD8837]   Drosophila melanogaster
FBal0273195 CG2807[NIG.2807R]   Drosophila melanogaster

26 Clones

Secondary Identifier DB identifier
EK233349 FBcl0068256
EK144550 FBcl0068316
EK154426 FBcl0068338
EK185030 FBcl0068506
EK112435 FBcl0068544
EK102918 FBcl0068734
EK046810 FBcl0069092
EP05641 FBcl0074209
EP16319 FBcl0074227
EN00942 FBcl0090775
GM09692 FBcl0137503
RE18731 FBcl0212296
RE57177 FBcl0212333
RE14559 FBcl0212335
RH74732 FBcl0254774
AT25243 FBcl0296642
RM04035 FBcl0371979
RM03935 FBcl0371980
RM03635 FBcl0371981
RM03535 FBcl0371982
RP001047970 FBcl0576238
RP001022280 FBcl0576239
RP001049438 FBcl0576240
RP001020992 FBcl0576241
RP001055328 FBcl0576242
RP001055771 FBcl0576243

4 Exons

DB identifier Symbol
FBgn0031266:1 CG2807:1
FBgn0031266:2 CG2807:2
FBgn0031266:3 CG2807:3
FBgn0031266:4 CG2807:4

2 Transcripts

DB identifier Gene
FBtr0078068 CG2807
FBtr0332340 CG2807

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0078068-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0332340-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0078068-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0332340-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

7 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
33235 NCBI Entrez Gene identifiers FBgn0031266
59491 BioGRID FBgn0031266

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 732.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 778.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 597.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1014.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1068.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 630.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 545.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 682.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 313.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 889.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 545.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 556.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 538.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 881.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 677.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 534.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 734.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 574.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 663.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 551.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 715.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 746.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 673.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 720.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 675.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1058.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1413.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1885.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1028.0
FBgn0031266 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 811.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0031266:1_FBgn0031266:2 Drosophila melanogaster
intron_FBgn0031266:2_FBgn0031266:3 Drosophila melanogaster
intron_FBgn0031266:2_FBgn0031266:4 Drosophila melanogaster

30 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage CG2807 none 0.019502901   19067489
Lipid storage CG2807 none -2.688185462   19067489
ERK signaling CG2807 ERK activation reduced weak   17086199
Cytokinesis regulation CG2807 Binucleate cells with decreased viability weak   15547975
Intracellular Listeria monocytogenes infection CG2807 Decreased GFP protein expression moderate   16020693
Hedgehog signaling CG2807 Decreased Hedgehog reporter activity -3.56   16311596
Constitutive protein secretion and Golgi organization (1) CG2807 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) CG2807 none sp   16496002
Cell size and cell-cycle regulation (1) CG2807 none sp   16496002
Candida albicans phagocytosis (1) CG2807 none np   16336044
Ca2+ channel regulation CG2807 Decreased Ca2+ influx 6   16645049
Microtubule assembly and organization CG2807 none np   18463163
Mutant human huntingtin aggregation CG2807 Decreased mutant human huntingtin aggregation <= -2   19789644
Muscle morphogenesis and function (1) CG2807 Lethal np   20220848
Muscle morphogenesis and function (1) CG2807 Lethal np   20220848
Muscle morphogenesis and function (3) CG2807 Spotty (discontinuous) Z-line np   20220848
Heat nociception (1) CG2807 none 0.2   21074052
Heart development and function (1) CG2807 Pupal lethal 0.14   20371351
Serratia marcescens infection (1) CG2807 none -0.48235294117647   19520911
Notch pathway regulation (4) CG2807 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) CG2807 Completely lethal (before pupal) sp   19363474
Hh pathway regulation CG2807 Downregulation of Hh pathway -0.412032698656824   17903264
Hh pathway regulation CG2807 Downregulation of Hh pathway -0.511180432995426   17903264
Notch pathway regulation (1) CG2807 Upregulation of Notch pathway np   20493818
RTK-Ras-ERK pathway regulation (1) CG2807 Decreased ERK phosphorylation after EGF stimulation -1.8 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) CG2807 Decreased ERK phosphorylation after EGF stimulation -4.54 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) CG2807 Decreased ERK phosphorylation after sSpitz and EGF stimulation -5.85 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) CG2807 Decreased ERK phosphorylation after sSpitz and EGF stimulation -4.35 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation CG2807 none 1.68   23263283
Glycosylation regulation (1) CG2807 Decreased Chp protein expression np   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom