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Gene : shn D. melanogaster

DB identifier  ? FBgn0003396 Secondary Identifier  ? CG7734
Name  ? schnurri Source  FlyBase
  • synonyms:
  • FBan0007734,
  • SHN,
  • l(2)04738,
  • umnitza,
  • Schnurri,
  • FBgn0043359,
  • BEST:SD06302,
  • quo,
  • FBgn0003396,
  • quo vadis,
  • EP(2)2359,
  • CG7734,
  • EP2359,
  • FBgn0010584,
  • FBgn0013727,
  • SD06302

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113 Alleles

DB identifier Symbol Allele Class Organism
FBal0280793 shn[T:Avic\GFP-SF,T:Zzzz\FLAG,T:Zzzz\PSP.CS,T:Zzzz\TEV.CS,T:Zzzz\BLRP]   Drosophila melanogaster
FBal0178012 shn[DG02707]   Drosophila melanogaster
FBal0178011 shn[DG16707]   Drosophila melanogaster
FBal0178004 shn[d05100]   Drosophila melanogaster
FBal0146801 shn[umnitza]   Drosophila melanogaster
FBal0178002 shn[d08990]   Drosophila melanogaster
FBal0178003 shn[d05704]   Drosophila melanogaster
FBal0178005 shn[d05067]   Drosophila melanogaster
FBal0178006 shn[d04875]   Drosophila melanogaster
FBal0177998 shn[f07724]   Drosophila melanogaster
FBal0119639 shn[EP2359]   Drosophila melanogaster
FBal0177999 shn[e04221]   Drosophila melanogaster
FBal0178000 shn[e02038]   Drosophila melanogaster
FBal0044341 shn[04738] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0178001 shn[e01147]   Drosophila melanogaster
FBal0178007 shn[c04954]   Drosophila melanogaster
FBal0178008 shn[c01897]   Drosophila melanogaster
FBal0178009 shn[c00951]   Drosophila melanogaster
FBal0178010 shn[c00553]   Drosophila melanogaster
FBal0158678 shn[EY02098]   Drosophila melanogaster
FBal0046435 shn[k16803]   Drosophila melanogaster
FBal0044301 shn[k04412]   Drosophila melanogaster
FBal0044302 shn[k16131]   Drosophila melanogaster
FBal0146809 shn[166]   Drosophila melanogaster
FBal0122907 shn[EP644]   Drosophila melanogaster
FBal0129076 shn[EP829]   Drosophila melanogaster
FBal0129077 shn[EP2139]   Drosophila melanogaster
FBal0154596 shn[EP2279]   Drosophila melanogaster
FBal0044298 shn[05595]   Drosophila melanogaster
FBal0044299 shn[k00401]   Drosophila melanogaster

49 Clones

Secondary Identifier DB identifier
bs85h01 FBcl0052109
EC33259 FBcl0067561
EP03450 FBcl0081941
EK294023 FBcl0093516
EK123940 FBcl0093698
EK093805 FBcl0094250
EK093804 FBcl0094256
EK168815 FBcl0094388
EN17861 FBcl0096341
EN12724 FBcl0096343
EN17034 FBcl0096347
EN14429 FBcl0096351
EN03414 FBcl0096353
EN04544 FBcl0096357
EN09548 FBcl0096375
EN12627 FBcl0096377
GH23228 FBcl0130877
LP15979 FBcl0189500
LP22721 FBcl0189520
LP22828 FBcl0189533
LP21684 FBcl0189634
SD05634 FBcl0284576
SD26104 FBcl0284578
SD02320 FBcl0284582
SD04934 FBcl0284586
SD06302 FBcl0284588
SD20264 FBcl0284614
EC053187 FBcl0301891
EC051684 FBcl0301892
EC055721 FBcl0301893

12 Exons

DB identifier Symbol
FBgn0003396:3 shn:3
FBgn0003396:4 shn:4
FBgn0003396:7 shn:7
FBgn0003396:8 shn:8
FBgn0003396:9 shn:9
FBgn0003396:10 shn:10
FBgn0003396:11 shn:11
FBgn0003396:12 shn:12
FBgn0003396:5 shn:5
FBgn0003396:6 shn:6
FBgn0003396:2 shn:2
FBgn0003396:1 shn:1

6 Transcripts

DB identifier Gene
FBtr0088098 shn
FBtr0088101 shn
FBtr0088099 shn
FBtr0088100 shn
FBtr0330619 shn
FBtr0330620 shn

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0088098-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0088099-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0088100-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0088101-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330619-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0330620-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088098-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088099-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088100-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0088101-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330619-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0330620-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
36171 NCBI Entrez Gene identifiers FBgn0003396
61969 BioGRID FBgn0003396

12 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  
Fly Transcription Factor/microRNA Regulatory Network  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 850.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 797.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 682.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 768.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 728.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 563.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1625.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 922.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 794.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 886.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 861.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 662.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 886.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 512.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 983.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 453.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1206.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 851.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 370.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 737.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 780.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1329.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 608.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1625.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 473.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 925.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1313.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1156.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 568.0
FBgn0003396 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 661.0

11 Introns

DB identifier
Organism . Name
intron_FBgn0003396:3_FBgn0003396:4 Drosophila melanogaster
intron_FBgn0003396:4_FBgn0003396:7 Drosophila melanogaster
intron_FBgn0003396:7_FBgn0003396:8 Drosophila melanogaster
intron_FBgn0003396:8_FBgn0003396:9 Drosophila melanogaster
intron_FBgn0003396:9_FBgn0003396:10 Drosophila melanogaster
intron_FBgn0003396:10_FBgn0003396:11 Drosophila melanogaster
intron_FBgn0003396:11_FBgn0003396:12 Drosophila melanogaster
intron_FBgn0003396:2_FBgn0003396:4 Drosophila melanogaster
intron_FBgn0003396:5_FBgn0003396:7 Drosophila melanogaster
intron_FBgn0003396:6_FBgn0003396:7 Drosophila melanogaster
intron_FBgn0003396:1_FBgn0003396:4 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage shn none -1.266595099   19067489
Lipid storage shn none 1.505147576   19067489
Lipid storage shn none -0.957163886   19067489
Lipid storage shn none 1.197720246   19067489
ERK signaling shn ERK activation reduced strong   17086199
Intracellular Listeria monocytogenes infection shn Decreased GFP protein expression moderate   16020693
Cell size and cell-cycle regulation (1) shn none sp   16496002
Cell size and cell-cycle regulation (1) shn none sp   16496002
Dendrite pattern formation shn none np   16547170
Lipid storage shn Altered cluster number automated analysis   18408709
Heat nociception (1) shn none -1.17   21074052
Serratia marcescens infection (1) shn none -1.98924731182795   19520911
Notch pathway regulation (4) shn none 0   19363474
PGN-induced dJNK phosphorylation shn Decreased P-JNK protein expression with PGN -2.81 15 min PGN induction 19893628
Adiposity regulation (1) shn none 1.703   20074523
RTK-Ras-ERK pathway regulation (1) shn none -1.38 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) shn none -1.14 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shn none -0.23 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shn none -0.09 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation shn none 1.5   23263283

0 Submissions