modENCODE |  Help |  blog

Gene : rumi D. melanogaster
DB identifier  ? FBgn0086253 Secondary Identifier  ? CG31152
Name  ? rumi Source  FlyBase
  • synonyms:
  • CG17138,
  • CG31152,
  • FBgn0051152,
  • FBgn0039021,
  • FBgn0086253,
  • FBgn0084416,
  • FBan0031152
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

7 Alleles

DB identifier Symbol Allele Class Organism
FBal0220659 rumi[JF02269]   Drosophila melanogaster
FBal0210496 rumi[GD6235]   Drosophila melanogaster
FBal0216682 rumi[44]   Drosophila melanogaster
FBal0216683 rumi[79]   Drosophila melanogaster
FBal0216684 rumi[unspecified]   Drosophila melanogaster
FBal0216685 rumi[Delta26]   Drosophila melanogaster
FBal0216686 rumi[Scer\UAS.cAa]   Drosophila melanogaster

6 Clones

Secondary Identifier DB identifier
DPiM_LD29477 FBcl0741025
EK166339 FBcl0118898
LD12645 FBcl0158896
LD02738 FBcl0158909
LD29477 FBcl0173553
RE39506 FBcl0221599

3 Exons

DB identifier Symbol
FBgn0086253:3 rumi:3
FBgn0086253:2 rumi:2
FBgn0086253:1 rumi:1

2 Transcripts

DB identifier Gene
FBtr0310040 rumi
FBtr0084320 rumi

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0084320-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310040-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084320-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0310040-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

4 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
326122 NCBI Entrez Gene identifiers FBgn0086253
77376 BioGRID FBgn0086253

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 928.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 400.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 319.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 704.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 606.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 517.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 155.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 411.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 166.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 601.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 584.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 342.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 401.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 391.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 387.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 368.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 146.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 271.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 545.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 297.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 425.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 285.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 388.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 399.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 289.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 837.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 540.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 391.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 233.0
FBgn0086253 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 228.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0086253:3_FBgn0086253:2 Drosophila melanogaster
intron_FBgn0086253:3_FBgn0086253:1 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage rumi none -2.195559787   19067489
Lipid storage rumi none 0.161803821   19067489
Cell size and cell-cycle regulation (1) rumi none sp   16496002
Brucella melitensis infection rumi none 127.37   18654626
Muscle morphogenesis and function (1) rumi none np   20220848
Muscle morphogenesis and function (1) rumi none np   20220848
Heat nociception (1) rumi none -0.93   21074052
Heat nociception (1) rumi none -1.17   21074052
Heart development and function (1) rumi none 1   20371351
Serratia marcescens infection (1) rumi none 0.459016393442622   19520911
Notch pathway regulation (4) rumi Colour defects, bristle morphology defects, notum malformation death sp   19363474
Notch pathway regulation (4) rumi Colour defects, bristle morphology defects sp   19363474
Notch pathway regulation (1) rumi Downregulation of Notch pathway np   20493818
Hippo pathway regulation rumi none -0.1   23263283

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom