modENCODE |  Help |  blog

Gene : JhI-21 D. melanogaster

DB identifier  ? FBgn0028425 Secondary Identifier  ? CG12317
Name  ? JhI-21 Source  FlyBase
  • synonyms:
  • CG12317,
  • Jhl-21,
  • FBan0012317,
  • JHI-21,
  • unnamed,
  • FBgn0032403,
  • FBgn0028425

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

12 Alleles

DB identifier Symbol Allele Class Organism
FBal0282729 JhI-21[rev1]   Drosophila melanogaster
FBal0220434 JhI-21[GE15185]   Drosophila melanogaster
FBal0183067 JhI-21[e02252]   Drosophila melanogaster
FBal0130974 JhI-21[EP1187]   Drosophila melanogaster
FBal0128183 JhI-21[KG00977]   Drosophila melanogaster
FBal0207406 JhI-21[GD3466]   Drosophila melanogaster
FBal0215485 JhI-21[13]   Drosophila melanogaster
FBal0279273 JhI-21[HMS02271]   Drosophila melanogaster
FBal0271208 JhI-21[NIG.12317R]   Drosophila melanogaster
FBal0227218 JhI-21[CB-0787-3]   Drosophila melanogaster
FBal0227219 JhI-21[NP4794]   Drosophila melanogaster
FBal0238529 JhI-21[KK112996]   Drosophila melanogaster

134 Clones

Secondary Identifier DB identifier
DPiM_LD39658 FBcl0740920
AT06157 FBcl0031741
AT27271 FBcl0032087
EK143537 FBcl0091334
EK086212 FBcl0091394
EK060943 FBcl0091440
EK101062 FBcl0091508
EK109804 FBcl0091518
EK145840 FBcl0091556
EK075811 FBcl0091566
EK101944 FBcl0091582
EK050131 FBcl0091596
EK154643 FBcl0091602
EK263706 FBcl0091614
EK231057 FBcl0091632
EK157433 FBcl0091640
EK244159 FBcl0091648
EK093937 FBcl0091820
EK189639 FBcl0092644
GH22449 FBcl0135589
GM19569 FBcl0147174
LD06133 FBcl0162496
LD15180 FBcl0162497
LD02769 FBcl0162502
LD11373 FBcl0162503
LD02630 FBcl0162505
LD13517 FBcl0162506
LD10470 FBcl0162508
LD13329 FBcl0162549
LD35038 FBcl0170905

11 Exons

DB identifier Symbol
FBgn0028425:11 JhI-21:11
FBgn0028425:8 JhI-21:8
FBgn0028425:6 JhI-21:6
FBgn0028425:5 JhI-21:5
FBgn0028425:4 JhI-21:4
FBgn0028425:3 JhI-21:3
FBgn0028425:2 JhI-21:2
FBgn0028425:1 JhI-21:1
FBgn0028425:7 JhI-21:7
FBgn0028425:9 JhI-21:9
FBgn0028425:10 JhI-21:10

4 Transcripts

DB identifier Gene
FBtr0089656 JhI-21
FBtr0089655 JhI-21
FBtr0305089 JhI-21
FBtr0342608 JhI-21

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089655-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089656-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0342608-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0305089-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089655-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089656-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0342608-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0305089-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34624 NCBI Entrez Gene identifiers FBgn0028425

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2063.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2750.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 789.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1387.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1772.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1369.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1292.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 4309.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 4301.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1316.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 985.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 941.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2358.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 705.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1052.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 3986.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1194.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1318.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3602.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1429.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1200.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1485.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 860.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2765.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 4471.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2137.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1748.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 857.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 718.0
FBgn0028425 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 629.0

11 Introns

DB identifier
Organism . Name
intron_FBgn0028425:11_FBgn0028425:8 Drosophila melanogaster
intron_FBgn0028425:8_FBgn0028425:6 Drosophila melanogaster
intron_FBgn0028425:6_FBgn0028425:5 Drosophila melanogaster
intron_FBgn0028425:5_FBgn0028425:4 Drosophila melanogaster
intron_FBgn0028425:4_FBgn0028425:3 Drosophila melanogaster
intron_FBgn0028425:3_FBgn0028425:2 Drosophila melanogaster
intron_FBgn0028425:2_FBgn0028425:1 Drosophila melanogaster
intron_FBgn0028425:11_FBgn0028425:7 Drosophila melanogaster
intron_FBgn0028425:7_FBgn0028425:6 Drosophila melanogaster
intron_FBgn0028425:10_FBgn0028425:8 Drosophila melanogaster
intron_FBgn0028425:9_FBgn0028425:8 Drosophila melanogaster

26 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage JhI-21 none 1.410193638   19067489
Lipid storage JhI-21 none 1.474021963   19067489
Cell size and cell-cycle regulation (1) JhI-21 none sp   16496002
Muscle morphogenesis and function (1) JhI-21 none np   20220848
Muscle morphogenesis and function (1) JhI-21 none np   20220848
Muscle morphogenesis and function (1) JhI-21 none np   20220848
Muscle morphogenesis and function (1) JhI-21 none np   20220848
Heat nociception (1) JhI-21 none 0.9   21074052
Heat nociception (1) JhI-21 none -1.17   21074052
Heat nociception (1) JhI-21 none -1.17   21074052
Heat nociception (1) JhI-21 none -0.7   21074052
Heart development and function (1) JhI-21 none 1   20371351
Serratia marcescens infection (1) JhI-21 none 0.145454545454545   19520911
Serratia marcescens infection (1) JhI-21 none -1.45   19520911
Serratia marcescens infection (1) JhI-21 none 0.641025641025641   19520911
Notch pathway regulation (4) JhI-21 none 0   19363474
Notch pathway regulation (4) JhI-21 none 0   19363474
Notch pathway regulation (4) JhI-21 none 0   19363474
Notch pathway regulation (4) JhI-21 none 0   19363474
Notch pathway regulation (4) JhI-21 none 0   19363474
Adiposity regulation (1) JhI-21 none -0.54   20074523
Adiposity regulation (1) JhI-21 none -0.235   20074523
Adiposity regulation (1) JhI-21 none -0.17   20074523
S2 cell spreading JhI-21 none np   21041442
Hippo pathway regulation JhI-21 none 2.11   23263283
Glycosylation regulation (1) JhI-21 none sp   21203496

0 Submissions