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Gene : RpS13 D. melanogaster

DB identifier  ? FBgn0010265 Secondary Identifier  ? CG13389
Name  ? Ribosomal protein S13 Source  FlyBase
  • synonyms:
  • ribosomal protein S17,
  • RPS13,
  • FBgn0010265,
  • Minute(2)32A,
  • M(2)32,
  • FBgn0021990,
  • Rp17,
  • M(2)29B,
  • CG13389,
  • M(2)32A,
  • Rp S13,
  • l(2)k09614,
  • FBan0013389,
  • S13

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13 Alleles

DB identifier Symbol Allele Class Organism
FBal0268402 RpS13[dsRNA.WIZ.Scer\UAS]   Drosophila melanogaster
FBal0248593 RpS13[G8009]   Drosophila melanogaster
FBal0284510 RpS13[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0064262 RpS13[k15708]   Drosophila melanogaster
FBal0064263 RpS13[k09614]   Drosophila melanogaster
FBal0048943 RpS13[1] loss of function allele Drosophila melanogaster
FBal0104004 RpS13[unspecified]   Drosophila melanogaster
FBal0147537 RpS13[dsRNA.cLa]   Drosophila melanogaster
FBal0263132 RpS13[HMS00135]   Drosophila melanogaster
FBal0286997 RpS13[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286998 RpS13[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208370 RpS13[GD8007]   Drosophila melanogaster
FBal0236036 RpS13[KK109083]   Drosophila melanogaster

363 Clones

Secondary Identifier DB identifier
78464 FBcl0404810
FGC022D11 FBcl0385768
97358 FBcl0404552
CK01.13C.G1 FBcl0404999
ESG0115d.B21_H07 FBcl0001843
ESG0118c.B21_B08 FBcl0002663
Nfly-029 FBcl0006195
ESG0114b.B21_H10 FBcl0007811
AT26338 FBcl0023525
AT25206 FBcl0023547
ESG0120c.B21_A03 FBcl0012073
EK111152 FBcl0042286
EK153547 FBcl0042300
EK230522 FBcl0042324
EK145816 FBcl0042416
EK093756 FBcl0042444
EK207626 FBcl0042468
EK114503 FBcl0042482
EK163709 FBcl0042516
EK185954 FBcl0043878
EK185041 FBcl0044554
EK214659 FBcl0044566
EC36246 FBcl0063261
EC02055 FBcl0063263
EC28879 FBcl0063269
EC24467 FBcl0063273
EC15041 FBcl0063275
EC37151 FBcl0067153
EC26011 FBcl0067157
EC30656 FBcl0067163

4 Exons

DB identifier Symbol
FBgn0010265:4 RpS13:4
FBgn0010265:2 RpS13:2
FBgn0010265:1 RpS13:1
FBgn0010265:3 RpS13:3

2 Transcripts

DB identifier Gene
FBtr0079724 RpS13
FBtr0100541 RpS13

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0079724-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100541-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0079724-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100541-3-prime-utr Drosophila melanogaster

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52 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
34149 NCBI Entrez Gene identifiers FBgn0010265
60275 BioGRID FBgn0010265

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 12624.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 13756.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 16267.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 17738.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 16247.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 18252.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 8391.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 19186.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 21174.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 12208.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 11545.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 20823.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 12522.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 17349.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 16338.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 14479.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 11725.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 11179.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 16082.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 11039.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 12854.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 9835.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 8263.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 6996.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 5728.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 10680.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 11527.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 11261.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 10416.0
FBgn0010265 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 11388.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0010265:3_FBgn0010265:2 Drosophila melanogaster
intron_FBgn0010265:2_FBgn0010265:1 Drosophila melanogaster
intron_FBgn0010265:4_FBgn0010265:2 Drosophila melanogaster

28 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpS13 none 1.519904205   19067489
Lipid storage RpS13 none -1.278041618   19067489
ERK signaling RpS13 ERK activation reduced weak   17086199
Drosophila C virus infection RpS13 Drosophila C virus replication down np   17040126
Cytokinesis regulation RpS13 Binucleate cells with decreased viability medium   15547975
Drosophila C virus infection RpS13 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpS13 Decreased Hedgehog reporter activity -3.24   16311596
Constitutive protein secretion and Golgi organization (1) RpS13 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) RpS13 Increased G1 DNA content, decreased G2 DNA content sp   16496002
Cell size and cell-cycle regulation (2) RpS13 Decreased viability 0.814   16496002
Cell size and cell-cycle regulation (3) RpS13 Decreased cell number 382   16496002
Cell size and cell-cycle regulation (4) RpS13 none below threshold   16496002
Microtubule assembly and organization RpS13 none np   18463163
Muscle morphogenesis and function (1) RpS13 Lethal np   20220848
Muscle morphogenesis and function (2) RpS13 Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Muscle morphogenesis and function (3) RpS13 none np   20220848
Heat nociception (1) RpS13 Developmentally lethal 1.41   21074052
Heart development and function (1) RpS13 Larval lethal 0   20371351
Serratia marcescens infection (1) RpS13 none -0.783333333333333   19520911
Notch pathway regulation (4) RpS13 Completely lethal (pupal) sp   19363474
Hh pathway regulation RpS13 Downregulation of Hh pathway -0.60601482086526   17903264
Hh pathway regulation RpS13 Downregulation of Hh pathway -0.517318947324849   17903264
Adiposity regulation (1) RpS13 none -1   20074523
RTK-Ras-ERK pathway regulation (1) RpS13 Decreased ERK phosphorylation after EGF stimulation -5.07 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) RpS13 Decreased ERK phosphorylation after EGF stimulation -6.3 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS13 Increased ERK phosphorylation after sSpitz and EGF stimulation 2.25 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS13 Increased ERK phosphorylation after sSpitz and EGF stimulation 3.77 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation RpS13 none -2.65   23263283

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