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Gene : alph D. melanogaster

DB identifier  ? FBgn0086361 Secondary Identifier  ? CG1906
Name  ? alphabet Source  FlyBase
  • synonyms:
  • FBgn0039672,
  • FBan0001906,
  • SK3-1,
  • FBgn0043570,
  • CG1906,
  • FBgn0084988,
  • alphabet,
  • PP2Cb,
  • pp2c99B,
  • FBgn0086361

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17 Alleles

DB identifier Symbol Allele Class Organism
FBal0120639 alph[XS-88]   Drosophila melanogaster
FBal0120642 alph[S-292]   Drosophila melanogaster
FBal0120641 alph[S-331]   Drosophila melanogaster
FBal0120640 alph[S-355]   Drosophila melanogaster
FBal0161962 alph[c04528]   Drosophila melanogaster
FBal0245484 alph[JF01192]   Drosophila melanogaster
FBal0212516 alph[MB01683]   Drosophila melanogaster
FBal0286039 alph[MI08597]   Drosophila melanogaster
FBal0186697 alph[f05750]   Drosophila melanogaster
FBal0186698 alph[f03783]   Drosophila melanogaster
FBal0209057 alph[GD8826]   Drosophila melanogaster
FBal0279152 alph[HMS02040]   Drosophila melanogaster
FBal0288395 alph[GMR]   Drosophila melanogaster
FBal0288396 alph[S-331.GMR]   Drosophila melanogaster
FBal0288397 alph[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0235126 alph[KK107730]   Drosophila melanogaster
FBal0272972 alph[NIG.1906R]   Drosophila melanogaster

178 Clones

Secondary Identifier DB identifier
DPiM_LD23542 FBcl0742088
AT19354 FBcl0019485
AT26717 FBcl0019487
AT25119 FBcl0019489
AT17868 FBcl0019497
AT10046 FBcl0019507
AT23145 FBcl0019509
AT28793 FBcl0019511
AT23140 FBcl0019517
AT02652 FBcl0019519
AT27307 FBcl0019523
AT28933 FBcl0019549
AT23229 FBcl0019649
AT07319 FBcl0019653
AT11738 FBcl0019659
ESG0112c.B21.1_E10 FBcl0001773
EK054438 FBcl0002902
EK270248 FBcl0008384
EK122230 FBcl0009632
EK227124 FBcl0009644
bs33b11 FBcl0050453
EN04810 FBcl0094667
GH07512 FBcl0115615
GH21007 FBcl0115621
GH14013 FBcl0115623
GH08576 FBcl0115635
GH23645 FBcl0115649
EK279247 FBcl0138308
EK017544 FBcl0138476
EK255228 FBcl0138812

14 Exons

DB identifier Symbol
FBgn0086361:13 alph:13
FBgn0086361:14 alph:14
FBgn0086361:2 alph:2
FBgn0086361:3 alph:3
FBgn0086361:1 alph:1
FBgn0086361:4 alph:4
FBgn0086361:5 alph:5
FBgn0086361:6 alph:6
FBgn0086361:7 alph:7
FBgn0086361:8 alph:8
FBgn0086361:9 alph:9
FBgn0086361:10 alph:10
FBgn0086361:11 alph:11
FBgn0086361:12 alph:12

6 Transcripts

DB identifier Gene
FBtr0085444 alph
FBtr0085445 alph
FBtr0085446 alph
FBtr0309241 alph
FBtr0085442 alph
FBtr0085443 alph

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0309241-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085442-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085443-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085444-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085445-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085446-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0309241-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085442-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085443-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085444-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085445-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085446-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43481 NCBI Entrez Gene identifiers FBgn0086361
68345 BioGRID FBgn0086361

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 2986.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 3233.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 2166.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1242.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2734.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2506.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2499.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 3573.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2446.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2029.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 3085.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2078.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1776.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1497.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2118.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2152.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2222.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2447.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2496.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2334.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2024.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2838.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 3313.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2828.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 3853.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 3850.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 3664.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 3360.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2417.0
FBgn0086361 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2396.0

14 Introns

DB identifier
Organism . Name
intron_FBgn0086361:1_FBgn0086361:4 Drosophila melanogaster
intron_FBgn0086361:4_FBgn0086361:5 Drosophila melanogaster
intron_FBgn0086361:5_FBgn0086361:7 Drosophila melanogaster
intron_FBgn0086361:7_FBgn0086361:8 Drosophila melanogaster
intron_FBgn0086361:8_FBgn0086361:13 Drosophila melanogaster
intron_FBgn0086361:13_FBgn0086361:14 Drosophila melanogaster
intron_FBgn0086361:2_FBgn0086361:5 Drosophila melanogaster
intron_FBgn0086361:8_FBgn0086361:11 Drosophila melanogaster
intron_FBgn0086361:3_FBgn0086361:4 Drosophila melanogaster
intron_FBgn0086361:5_FBgn0086361:6 Drosophila melanogaster
intron_FBgn0086361:6_FBgn0086361:7 Drosophila melanogaster
intron_FBgn0086361:8_FBgn0086361:9 Drosophila melanogaster
intron_FBgn0086361:9_FBgn0086361:10 Drosophila melanogaster
intron_FBgn0086361:9_FBgn0086361:12 Drosophila melanogaster

26 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage alph none -1.865377413   19067489
Lipid storage alph none -0.674490759   19067489
Cell size and cell-cycle regulation (1) alph none sp   16496002
Cell size and cell-cycle regulation (1) alph none sp   16496002
Mitochondrial biogenesis and function alph Decreased mitochondrial citrate synthase activity 0.715   18042644
Muscle morphogenesis and function (1) alph none np   20220848
Heat nociception (1) alph none 0.01   21074052
Heart development and function (1) alph none 1   20371351
Serratia marcescens infection (1) alph none -0.11   19520911
Notch pathway regulation (4) alph none 0   19363474
PGN-induced dJNK phosphorylation alph Increased P-JNK protein expression with PGN 2.26 15 min PGN induction 19893628
Notch pathway regulation (1) alph Downregulation of Notch pathway np   20493818
Notch pathway regulation (2) alph none np en-GAL4 20493818
Notch pathway regulation (2) alph none np en-GAL4 20493818
Notch pathway regulation (3) alph Only lethal with Notch np   20493818
Adiposity regulation (1) alph none -0.192   20074523
Blood cell homeostasis regulation (1) alph none np   20540764
Blood cell homeostasis regulation (2) alph none np   20540764
Vaccinia virus infection alph none sp   20585561
RTK-Ras-ERK pathway regulation (1) alph none 1.34 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) alph none 0.73 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) alph none 0.3 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) alph Increased ERK phosphorylation after sSpitz and EGF stimulation 1.52 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation alph none 0.19   23263283
Glycosylation regulation (1) alph none sp   21203496
Huntingtin (Htt) aggregates formation alph Increased formation of mutant Huntingtin (Httex1-Qn) protein aggregates np   20100940

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