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Gene : Syx1A D. melanogaster

DB identifier  ? FBgn0013343 Secondary Identifier  ? CG31136
Name  ? Syntaxin 1A Source  FlyBase
  • synonyms:
  • CG31136,
  • anon-WO02059370.54,
  • CG10716,
  • Syntaxin,
  • Syntaxin1A,
  • FBgn0039148,
  • syntaxin-1,
  • Syntx 1,
  • Syntaxin 1,
  • Syx,
  • FBgn0023459,
  • syt-1A,
  • Dsyntaxin-1A,
  • CG5448,
  • syntaxin 1A,
  • SyxA,
  • CT30033,
  • synt,
  • Dm Syx1,
  • FBgn0013343,
  • SYX1A,
  • FBan0031136,
  • FBgn0066005,
  • anon-EST:Gibbs4,
  • CG18615,
  • Syx1,
  • DmSyx1A,
  • STX1A,
  • FBgn0042210,
  • syx-1,
  • dSyx1,
  • Syntaxin-1A,
  • Syx-1A,
  • Syt1A,
  • l(3)06737,
  • syntaxin1,
  • FBgn0010900

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49 Alleles

DB identifier Symbol Allele Class Organism
FBal0099810 Syx1A[I236A]   Drosophila melanogaster
FBal0243293 Syx1A[tCH322-142K16]   Drosophila melanogaster
FBal0269141 Syx1A[T254I.Scer\UAS]   Drosophila melanogaster
FBal0197820 Syx1A[Scer\UAS.cBa]   Drosophila melanogaster
FBal0285585 Syx1A[WT.T:Ivir\HA1]   Drosophila melanogaster
FBal0285586 Syx1A[KARRAA.T:Ivir\HA1]   Drosophila melanogaster
FBal0181347 Syx1A[c05841]   Drosophila melanogaster
FBal0044376 Syx1A[06737] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0130579 Syx1A[EP3215]   Drosophila melanogaster
FBal0043686 Syx1A[05618]   Drosophila melanogaster
FBal0043687 Syx1A[10660]   Drosophila melanogaster
FBal0056004 Syx1A[17]   Drosophila melanogaster
FBal0056008 Syx1A[118]   Drosophila melanogaster
FBal0056005 Syx1A[177] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0056000 Syx1A[287] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0055999 Syx1A[294]   Drosophila melanogaster
FBal0055998 Syx1A[2]   Drosophila melanogaster
FBal0055997 Syx1A[4] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0056002 Syx1A[204] hypomorphic allele - genetic evidence Drosophila melanogaster
FBal0101129 Syx1A[j4D9]   Drosophila melanogaster
FBal0120321 Syx1A[L247]   Drosophila melanogaster
FBal0120320 Syx1A[L2]   Drosophila melanogaster
FBal0056003 Syx1A[1] loss of function allele Drosophila melanogaster
FBal0056010 Syx1A[+t11]   Drosophila melanogaster
FBal0056009 Syx1A[+t6]   Drosophila melanogaster
FBal0083729 Syx1A[hs.PW]   Drosophila melanogaster
FBal0092505 Syx1A[+t13]   Drosophila melanogaster
FBal0099811 Syx1A[I212A]   Drosophila melanogaster
FBal0099812 Syx1A[H3-N]   Drosophila melanogaster
FBal0099813 Syx1A[H3-C]   Drosophila melanogaster

77 Clones

Secondary Identifier DB identifier
EC38528 FBcl0062323
EP21007 FBcl0075533
EN05963 FBcl0091911
EN05942 FBcl0097479
EN11502 FBcl0097593
GH19130 FBcl0118573
EK144720 FBcl0119924
EK216150 FBcl0119952
EK256355 FBcl0119994
EK281364 FBcl0119998
EK184735 FBcl0120002
EK126113 FBcl0120010
EK058962 FBcl0120014
EK037141 FBcl0120018
EK084464 FBcl0120022
EK059340 FBcl0120040
EK219725 FBcl0120044
EK058346 FBcl0120108
EK059309 FBcl0120128
EK005628 FBcl0120136
EK244950 FBcl0120146
EK305355 FBcl0120274
EK305360 FBcl0120358
GM28941 FBcl0146740
HL03543 FBcl0149630
LD43943 FBcl0170400
LD41346 FBcl0170437
RH73222 FBcl0256321
SD26062 FBcl0277326
Parral_28_F01 FBcl0394406

3 Exons

DB identifier Symbol
FBgn0013343:2 Syx1A:2
FBgn0013343:3 Syx1A:3
FBgn0013343:1 Syx1A:1

2 Transcripts

DB identifier Gene
FBtr0084588 Syx1A
FBtr0303161 Syx1A

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0084588-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0303161-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084588-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0303161-3-prime-utr Drosophila melanogaster

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45 Pathways

3 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42854 NCBI Entrez Gene identifiers FBgn0013343
37841 NCBI Entrez Gene identifiers FBgn0013343
67788 BioGRID FBgn0013343

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 951.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1420.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 646.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 469.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1035.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1139.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1215.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 665.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 967.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 948.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1141.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 468.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1223.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 521.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 882.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 897.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1650.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 750.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 488.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 933.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 563.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1896.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1068.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1943.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 516.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 703.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 862.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1228.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 596.0
FBgn0013343 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 600.0

1 Introns

DB identifier
Organism . Name
intron_FBgn0013343:3_FBgn0013343:1 Drosophila melanogaster

23 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Syx1A none 0.137421555   19067489
Lipid storage Syx1A none 0.969297754   19067489
Lipid storage Syx1A none -0.866085167   19067489
Lipid storage Syx1A none 0.383274165   19067489
Cytokinesis Syx1A Multi-nucleate cells np   15380073
Intracellular Listeria monocytogenes infection Syx1A Decreased GFP protein expression moderate   16020693
Mycobacterial infection (1) - M. fortuitum infection Syx1A Decreased M. fortuitum intracellular infection 4.5 measurement after 3 days 16020694
Mycobacterial infection (2) - E. coli phagocytosis Syx1A Decreased E. coli phagocytosis np   16020694
Cell size and cell-cycle regulation (1) Syx1A none sp   16496002
Muscle morphogenesis and function (1) Syx1A Lethal np   20220848
Muscle morphogenesis and function (1) Syx1A Lethal np   20220848
Heat nociception (1) Syx1A Developmentally lethal -0.91   21074052
Heart development and function (1) Syx1A none 1   20371351
Heart development and function (2) Syx1A Decreased viability 4.08   20371351
Serratia marcescens infection (1) Syx1A none 0.0510204081632653   19520911
Notch pathway regulation (4) Syx1A Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) Syx1A Completely lethal (before pupal) sp   19363474
PGN-induced dJNK phosphorylation Syx1A Increased P-JNK protein expression with PGN 2.66 60 min PGN induction 19893628
Notch pathway regulation (3) Syx1A Lethal np   20493818
Adiposity regulation (1) Syx1A none -0.599   20074523
Glycosylation regulation (1) Syx1A none sp   21203496
Glycosylation regulation (1) Syx1A Lethal np   21203496
Glycosylation regulation (1) Syx1A Lethal np   21203496

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