modENCODE |  Help |  blog

Gene : RpL3 D. melanogaster

DB identifier  ? FBgn0020910 Secondary Identifier  ? CG4863
Name  ? Ribosomal protein L3 Source  FlyBase
  • synonyms:
  • FBgn0020910,
  • CG4863,
  • FBan0004863,
  • anon-EST:GressD4,
  • Rpl3,
  • L3,
  • FBgn0025328,
  • ribosomal protein L3

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

8 Alleles

DB identifier Symbol Allele Class Organism
FBal0266256 RpL3[GL00556]   Drosophila melanogaster
FBal0196047 RpL3[e03180]   Drosophila melanogaster
FBal0259769 RpL3[KK109091]   Drosophila melanogaster
FBal0137383 RpL3[KG05440]   Drosophila melanogaster
FBal0287514 RpL3[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208345 RpL3[GD13494]   Drosophila melanogaster
FBal0208346 RpL3[GD16490]   Drosophila melanogaster
FBal0241628 RpL3[G13893]   Drosophila melanogaster

1305 Clones

Secondary Identifier DB identifier
UUGC0366 FBcl0000487
UUGC0893 FBcl0004979
EK201730 FBcl0015704
AT28186 FBcl0035789
AT25407 FBcl0035793
AT23147 FBcl0035797
AT22104 FBcl0035805
AT29878 FBcl0035823
AT22732 FBcl0035865
AT29909 FBcl0035867
AT09633 FBcl0035883
AT19339 FBcl0035895
AT19102 FBcl0035917
AT11130 FBcl0035919
AT28975 FBcl0035923
EP09947 FBcl0086525
EN01624 FBcl0099747
EN12940 FBcl0099749
EN13119 FBcl0099751
EN09056 FBcl0099753
EN02132 FBcl0099755
GH07350 FBcl0102909
GH03318 FBcl0102925
GH04436 FBcl0102965
GH13891 FBcl0103003
GH27236 FBcl0103041
GH02319 FBcl0103089
GH17245 FBcl0103091
GH17882 FBcl0103145
GH10692 FBcl0103185

9 Exons

DB identifier Symbol
FBgn0020910:1 RpL3:1
FBgn0020910:2 RpL3:2
FBgn0020910:4 RpL3:4
FBgn0020910:3 RpL3:3
FBgn0020910:6 RpL3:6
FBgn0020910:7 RpL3:7
FBgn0020910:8 RpL3:8
FBgn0020910:5 RpL3:5
FBgn0020910:9 RpL3:9

4 Transcripts

DB identifier Gene
FBtr0082347 RpL3
FBtr0082346 RpL3
FBtr0302586 RpL3
FBtr0336783 RpL3

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0082347-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0082346-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0302586-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336783-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0082347-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0082346-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0302586-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336783-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

49 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
41347 NCBI Entrez Gene identifiers FBgn0020910
66481 BioGRID FBgn0020910

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 13227.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 14293.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 15271.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 18091.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 16082.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 13240.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 10217.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 17315.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 13829.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 10073.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 10686.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 13097.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 10793.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 16421.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 22615.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 13539.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 11134.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 10627.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 18511.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 10964.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 15224.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 9892.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 7363.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 7294.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 6625.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 14341.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 14369.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 12555.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 11510.0
FBgn0020910 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 12436.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0020910:1_FBgn0020910:2 Drosophila melanogaster
intron_FBgn0020910:2_FBgn0020910:4 Drosophila melanogaster
intron_FBgn0020910:2_FBgn0020910:3 Drosophila melanogaster
intron_FBgn0020910:3_FBgn0020910:6 Drosophila melanogaster
intron_FBgn0020910:6_FBgn0020910:7 Drosophila melanogaster
intron_FBgn0020910:7_FBgn0020910:8 Drosophila melanogaster
intron_FBgn0020910:3_FBgn0020910:5 Drosophila melanogaster
intron_FBgn0020910:5_FBgn0020910:7 Drosophila melanogaster
intron_FBgn0020910:7_FBgn0020910:9 Drosophila melanogaster

36 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpL3 Increased lipid droplet area 2.350092405   19067489
Lipid storage RpL3 Increased lipid droplet area 2.844190652   19067489
ERK signaling RpL3 ERK activation reduced weak   17086199
Drosophila C virus infection RpL3 Drosophila C virus replication down np   17040126
Cytokinesis regulation RpL3 Binucleate cells with decreased viability medium   15547975
Drosophila C virus infection RpL3 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpL3 Decreased Hedgehog reporter activity -2.67   16311596
Constitutive protein secretion and Golgi organization (1) RpL3 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) RpL3 Decreased viability sp   16496002
Cell size and cell-cycle regulation (2) RpL3 none 1.264   16496002
Cell size and cell-cycle regulation (3) RpL3 none 494   16496002
Candida albicans phagocytosis (1) RpL3 none np   16336044
Mitochondrial biogenesis and function RpL3 Increased mitochondrial citrate synthase activity, decreased viability 1.18   18042644
Muscle morphogenesis and function (1) RpL3 Lethal np   20220848
Muscle morphogenesis and function (1) RpL3 Lethal np   20220848
Muscle morphogenesis and function (3) RpL3 Split myofibril, fading Z-line np   20220848
Heat nociception (1) RpL3 Increased noxious heat avoidance, lethal 1.71   21074052
Heat nociception (1) RpL3 none 0.24   21074052
Heart development and function (1) RpL3 Larval lethal 0   20371351
Serratia marcescens infection (1) RpL3 none -0.298701298701298   19520911
Serratia marcescens infection (1) RpL3 none -0.878378378378378   19520911
Notch pathway regulation (4) RpL3 none 0   19363474
Notch pathway regulation (4) RpL3 Completely lethal (before pupal) sp   19363474
Notch pathway regulation (4) RpL3 Completely lethal (pupal) sp   19363474
Hh pathway regulation RpL3 Downregulation of Hh pathway -0.40197312267493   17903264
Notch pathway regulation (1) RpL3 Downregulation of Notch pathway np   20493818
Adiposity regulation (1) RpL3 none -0.16   20074523
Adiposity regulation (1) RpL3 none 0.094   20074523
Blood cell homeostasis regulation (1) RpL3 none np   20540764
Blood cell homeostasis regulation (2) RpL3 none np   20540764

0 Submissions