modENCODE |  Help |  blog

Gene : Atg18 D. melanogaster

DB identifier  ? FBgn0035850 Secondary Identifier  ? CG7986
Name  ? Autophagy-specific gene 18 Source  FlyBase
  • synonyms:
  • FBan0007986,
  • ATG18,
  • CG7986,
  • ATG18.1,
  • FBgn0035850,
  • Atg18a

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

9 Alleles

DB identifier Symbol Allele Class Organism
FBal0263634 Atg18[Delta585]   Drosophila melanogaster
FBal0280769 Atg18[tub.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0276902 Atg18[G3744]   Drosophila melanogaster
FBal0257851 Atg18[HMS01193]   Drosophila melanogaster
FBal0134302 Atg18[KG03090]   Drosophila melanogaster
FBal0240865 Atg18[JF02898]   Drosophila melanogaster
FBal0198784 Atg18[GD12342]   Drosophila melanogaster
FBal0230561 Atg18[KK100064]   Drosophila melanogaster
FBal0222073 Atg18[5-SZ-3505]   Drosophila melanogaster

60 Clones

Secondary Identifier DB identifier
UUGC1107 FBcl0005911
EK211926 FBcl0104830
EK244531 FBcl0104836
EK233156 FBcl0104838
EK147701 FBcl0104840
EK147825 FBcl0104842
EK185345 FBcl0104844
EK305910 FBcl0104846
EK116318 FBcl0104848
EK053016 FBcl0104852
EK188506 FBcl0104856
EK213349 FBcl0104860
EK172543 FBcl0104862
EK295825 FBcl0104866
EK054232 FBcl0104870
EK156124 FBcl0104872
EK145009 FBcl0104874
EK254328 FBcl0104894
GH10353 FBcl0109929
GM06583 FBcl0142464
LD16938 FBcl0153455
LD12054 FBcl0153456
LD18534 FBcl0153458
LD13202 FBcl0153460
LD04617 FBcl0153463
LD45781 FBcl0166387
LD38705 FBcl0166391
LD32514 FBcl0166394
LD45423 FBcl0166397
LD47019 FBcl0166399

13 Exons

DB identifier Symbol
FBgn0035850:6 Atg18:6
FBgn0035850:8 Atg18:8
FBgn0035850:10 Atg18:10
FBgn0035850:3 Atg18:3
FBgn0035850:5 Atg18:5
FBgn0035850:1 Atg18:1
FBgn0035850:7 Atg18:7
FBgn0035850:9 Atg18:9
FBgn0035850:12 Atg18:12
FBgn0035850:13 Atg18:13
FBgn0035850:4 Atg18:4
FBgn0035850:2 Atg18:2
FBgn0035850:11 Atg18:11

6 Transcripts

DB identifier Gene
FBtr0076691 Atg18
FBtr0321321 Atg18
FBtr0076692 Atg18
FBtr0321320 Atg18
FBtr0321319 Atg18
FBtr0076693 Atg18

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076691-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076692-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0076693-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0321319-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0321320-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0321321-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076691-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076692-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076693-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0321319-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0321320-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0321321-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
38913 NCBI Entrez Gene identifiers FBgn0035850
64333 BioGRID FBgn0035850

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 803.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1027.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 801.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 752.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1126.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 540.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1079.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1180.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 503.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1044.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 993.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 557.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 775.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 679.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1147.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 540.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1086.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 496.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 771.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 997.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1069.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 766.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 711.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 906.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 521.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1390.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2250.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1138.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 659.0
FBgn0035850 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 812.0

14 Introns

DB identifier
Organism . Name
intron_FBgn0035850:3_FBgn0035850:5 Drosophila melanogaster
intron_FBgn0035850:5_FBgn0035850:6 Drosophila melanogaster
intron_FBgn0035850:6_FBgn0035850:8 Drosophila melanogaster
intron_FBgn0035850:8_FBgn0035850:10 Drosophila melanogaster
intron_FBgn0035850:1_FBgn0035850:5 Drosophila melanogaster
intron_FBgn0035850:6_FBgn0035850:7 Drosophila melanogaster
intron_FBgn0035850:7_FBgn0035850:10 Drosophila melanogaster
intron_FBgn0035850:8_FBgn0035850:9 Drosophila melanogaster
intron_FBgn0035850:9_FBgn0035850:13 Drosophila melanogaster
intron_FBgn0035850:7_FBgn0035850:9 Drosophila melanogaster
intron_FBgn0035850:9_FBgn0035850:12 Drosophila melanogaster
intron_FBgn0035850:4_FBgn0035850:6 Drosophila melanogaster
intron_FBgn0035850:2_FBgn0035850:5 Drosophila melanogaster
intron_FBgn0035850:7_FBgn0035850:11 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Atg18 none 0.237540821   19067489
Lipid storage Atg18 none -2.09986113   19067489
Cell size and cell-cycle regulation (1) Atg18 none sp   16496002
Cellularisation regulation Atg18 none np   16421189
Muscle morphogenesis and function (1) Atg18 none np   20220848
Muscle morphogenesis and function (1) Atg18 none np   20220848
Heat nociception (1) Atg18 none 0.46   21074052
Heart development and function (1) Atg18 none 1   20371351
Serratia marcescens infection (1) Atg18 none 0.9   19520911
Notch pathway regulation (4) Atg18 none 0   19363474
Notch pathway regulation (4) Atg18 none 0   19363474
Adiposity regulation (1) Atg18 none 0.655   20074523
Hippo pathway regulation Atg18 none -0.32   23263283

0 Submissions