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Gene : orb D. melanogaster

DB identifier  ? FBgn0004882 Secondary Identifier  ? CG10868
Name  ? oo18 RNA-binding protein Source  FlyBase
  • synonyms:
  • FBgn0004882,
  • 151666_s_at,
  • FBan0010868,
  • oo18,
  • ORB,
  • oo18 RNA binding,
  • oo18 RNA-binding protein,
  • fs(3)00107,
  • CG10868

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34 Alleles

DB identifier Symbol Allele Class Organism
FBal0266937 orb[MI04761]   Drosophila melanogaster
FBal0281187 orb[GL01484]   Drosophila melanogaster
FBal0218919 orb[DG06208]   Drosophila melanogaster
FBal0178566 orb[f01128]   Drosophila melanogaster
FBal0178564 orb[f03380]   Drosophila melanogaster
FBal0178565 orb[f01613]   Drosophila melanogaster
FBal0039709 orb[dec] amorphic allele - genetic evidence Drosophila melanogaster
FBal0158861 orb[EY08547]   Drosophila melanogaster
FBal0151660 orb[9D6-3]   Drosophila melanogaster
FBal0151661 orb[7E4-5]   Drosophila melanogaster
FBal0151663 orb[7D1-16]   Drosophila melanogaster
FBal0039708 orb[F343] amorphic allele - genetic evidence Drosophila melanogaster
FBal0150314 orb[cj]   Drosophila melanogaster
FBal0151664 orb[36-53]   Drosophila melanogaster
FBal0151666 orb[11-50]   Drosophila melanogaster
FBal0151665 orb[116-8]   Drosophila melanogaster
FBal0039707 orb[F303]   Drosophila melanogaster
FBal0035315 orb[mel]   Drosophila melanogaster
FBal0151659 orb[unspecified]   Drosophila melanogaster
FBal0151662 orb[7D4-11]   Drosophila melanogaster
FBal0056357 orb[DeltaHN.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0056623 orb[8E2Hd.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0056622 orb[AE.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0056621 orb[AN.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0056356 orb[D5.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0056616 orb[NH.Hsp83.T:Ecol\lacZ]   Drosophila melanogaster
FBal0270639 orb[NIG.10868R]   Drosophila melanogaster
FBal0210258 orb[GD6655]   Drosophila melanogaster
FBal0219870 orb[JF01864]   Drosophila melanogaster
FBal0288117 orb[EP-203]   Drosophila melanogaster

106 Clones

Secondary Identifier DB identifier
DPiM_AT10134 FBcl0741424
UUGC1140 FBcl0006039
AT24119 FBcl0033241
AT31163 FBcl0033243
AT12018 FBcl0033249
AT17628 FBcl0033251
AT25646 FBcl0033257
AT10132 FBcl0033267
AT04580 FBcl0033277
AT17502 FBcl0033289
AT31896 FBcl0033291
AT09767 FBcl0033297
AT10134 FBcl0033301
AT27844 FBcl0033305
AT30728 FBcl0033311
AT11391 FBcl0033315
AT09496 FBcl0033317
AT02736 FBcl0033321
AT24115 FBcl0033329
AT25155 FBcl0033335
AT02271 FBcl0033343
AT03410 FBcl0033347
AT26330 FBcl0033351
AT17046 FBcl0033355
AT15227 FBcl0033361
AT22329 FBcl0033369
AT10306 FBcl0033377
AT15676 FBcl0033383
AT26367 FBcl0033395
AT06106 FBcl0033403

17 Exons

DB identifier Symbol
FBgn0004882:17 orb:17
FBgn0004882:16 orb:16
FBgn0004882:15 orb:15
FBgn0004882:11 orb:11
FBgn0004882:10 orb:10
FBgn0004882:9 orb:9
FBgn0004882:7 orb:7
FBgn0004882:6 orb:6
FBgn0004882:5 orb:5
FBgn0004882:2 orb:2
FBgn0004882:8 orb:8
FBgn0004882:13 orb:13
FBgn0004882:3 orb:3
FBgn0004882:14 orb:14
FBgn0004882:12 orb:12
FBgn0004882:4 orb:4
FBgn0004882:1 orb:1

7 Transcripts

DB identifier Gene
FBtr0100227 orb
FBtr0100228 orb
FBtr0301491 orb
FBtr0084385 orb
FBtr0084384 orb
FBtr0334498 orb
FBtr0084386 orb

14 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0084384-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0084386-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0084385-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100227-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100228-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301491-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334498-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084384-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084386-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0084385-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100227-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100228-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301491-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334498-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42752 NCBI Entrez Gene identifiers FBgn0004882
67695 BioGRID FBgn0004882

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 138.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 84.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 160.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 158.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 210.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 131.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 157.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 176.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 330.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 102.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 131.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 121.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 281.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 107.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 102.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 79.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 90.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 205.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 154.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 71.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 132.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 771.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 115.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 94.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 291.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 4812.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 731.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 205.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 262.0
FBgn0004882 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 74.0

16 Introns

DB identifier
Organism . Name
intron_FBgn0004882:13_FBgn0004882:11 Drosophila melanogaster
intron_FBgn0004882:11_FBgn0004882:10 Drosophila melanogaster
intron_FBgn0004882:10_FBgn0004882:9 Drosophila melanogaster
intron_FBgn0004882:9_FBgn0004882:7 Drosophila melanogaster
intron_FBgn0004882:7_FBgn0004882:6 Drosophila melanogaster
intron_FBgn0004882:6_FBgn0004882:5 Drosophila melanogaster
intron_FBgn0004882:5_FBgn0004882:3 Drosophila melanogaster
intron_FBgn0004882:8_FBgn0004882:7 Drosophila melanogaster
intron_FBgn0004882:14_FBgn0004882:12 Drosophila melanogaster
intron_FBgn0004882:12_FBgn0004882:11 Drosophila melanogaster
intron_FBgn0004882:5_FBgn0004882:4 Drosophila melanogaster
intron_FBgn0004882:17_FBgn0004882:16 Drosophila melanogaster
intron_FBgn0004882:16_FBgn0004882:15 Drosophila melanogaster
intron_FBgn0004882:15_FBgn0004882:11 Drosophila melanogaster
intron_FBgn0004882:5_FBgn0004882:2 Drosophila melanogaster
intron_FBgn0004882:5_FBgn0004882:1 Drosophila melanogaster

23 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage orb none -1.632865299   19067489
Lipid storage orb none 1.607239619   19067489
Lipid storage orb none 1.525514178   19067489
Lipid storage orb none -1.768705103   19067489
Constitutive protein secretion and Golgi organization (1) orb Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) orb none sp   16496002
Muscle morphogenesis and function (1) orb none np   20220848
Muscle morphogenesis and function (1) orb Weak flyer np   20220848
Muscle morphogenesis and function (2) orb Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Heat nociception (1) orb none -1.17   21074052
Heat nociception (1) orb none -1.17   21074052
Heart development and function (1) orb none 1   20371351
Serratia marcescens infection (1) orb none 0.530864197530864   19520911
Notch pathway regulation (4) orb none 0   19363474
Notch pathway regulation (4) orb Bristle morphology defects, notum malformation death sp   19363474
PGN-induced dJNK phosphorylation orb Increased P-JNK protein expression with PGN 2.02 60 min PGN induction 19893628
Notch pathway regulation (1) orb Upregulation of Notch pathway np   20493818
Notch pathway regulation (2) orb Lethal very strong en-GAL4 20493818
Notch pathway regulation (2) orb none np C96-GAL4 20493818
Notch pathway regulation (3) orb Upregulation of Notch pathway np   20493818
Adiposity regulation (1) orb none 0.328   20074523
Hippo pathway regulation orb none 1.02   23263283
Glycosylation regulation (1) orb none sp   21203496

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