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Gene : RpS4 D. melanogaster

DB identifier  ? FBgn0011284 Secondary Identifier  ? CG11276
Name  ? Ribosomal protein S4 Source  FlyBase
  • synonyms:
  • RPS4,
  • CG11276,
  • FBgn0025296,
  • FBgn0011284,
  • FBan0011276,
  • Rp S4,
  • SX4,
  • anon-EST:Posey270

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6 Alleles

DB identifier Symbol Allele Class Organism
FBal0286421 RpS4[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286422 RpS4[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0270805 RpS4[NIG.11276R]   Drosophila melanogaster
FBal0208390 RpS4[GD13437]   Drosophila melanogaster
FBal0208391 RpS4[GD17217]   Drosophila melanogaster
FBal0235920 RpS4[KK108912]   Drosophila melanogaster

823 Clones

Secondary Identifier DB identifier
SD12541 FBcl0355804
SD15741 FBcl0355805
RE11407 FBcl0355820
RE26375 FBcl0355856
RE14305 FBcl0355861
GM21110 FBcl0355897
GM21151 FBcl0355898
GM21296 FBcl0355899
GM32069 FBcl0355905
RH61861 FBcl0355959
RH33750 FBcl0356003
RH29035 FBcl0356039
RH71990 FBcl0356069
RH13579 FBcl0356080
RH50622 FBcl0356120
RH63907 FBcl0356135
RH67747 FBcl0356145
SD27621 FBcl0356166
SD27727 FBcl0356167
SD18228 FBcl0356173
EN04237 FBcl0356182
EN15349 FBcl0356195
EN15704 FBcl0356196
EN16738 FBcl0356197
LP21724 FBcl0356210
EN01250 FBcl0356211
ESG0115d.B21_A08 FBcl0001531
ESG0117a.B21_E03 FBcl0002653
ESG018b.E21.1_F10 FBcl0006261
ESG017c.E21.3_H10 FBcl0006677

7 Exons

DB identifier Symbol
FBgn0011284:1 RpS4:1
FBgn0011284:3 RpS4:3
FBgn0011284:4 RpS4:4
FBgn0011284:5 RpS4:5
FBgn0011284:6 RpS4:6
FBgn0011284:7 RpS4:7
FBgn0011284:2 RpS4:2

2 Transcripts

DB identifier Gene
FBtr0075884 RpS4
FBtr0075885 RpS4

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0075884-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0075885-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075884-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0075885-3-prime-utr Drosophila melanogaster

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52 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39484 NCBI Entrez Gene identifiers FBgn0011284
64829 BioGRID FBgn0011284

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 12932.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 22807.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 24957.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 16927.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 17760.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 22843.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 17242.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 24061.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 14523.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 16938.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 19926.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 19821.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 18782.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 22059.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 20672.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 25592.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 14514.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 16223.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 23692.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 17967.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 29442.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 16298.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 14052.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 11162.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 9193.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 12749.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 19402.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 17430.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 20852.0
FBgn0011284 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 12760.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0011284:1_FBgn0011284:3 Drosophila melanogaster
intron_FBgn0011284:3_FBgn0011284:4 Drosophila melanogaster
intron_FBgn0011284:4_FBgn0011284:5 Drosophila melanogaster
intron_FBgn0011284:5_FBgn0011284:6 Drosophila melanogaster
intron_FBgn0011284:6_FBgn0011284:7 Drosophila melanogaster
intron_FBgn0011284:2_FBgn0011284:4 Drosophila melanogaster

29 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpS4 Increased lipid droplet area 3.779997374   19067489
Lipid storage RpS4 Increased lipid droplet area 4.239730341   19067489
Drosophila C virus infection RpS4 Drosophila C virus replication down np   17040126
Cytokinesis regulation RpS4 Binucleate cells with decreased viability medium   15547975
Intracellular Listeria monocytogenes infection RpS4 Increased GFP protein expression moderate   16020693
Drosophila C virus infection RpS4 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpS4 Decreased Hedgehog reporter activity -2.9   16311596
Constitutive protein secretion and Golgi organization (1) RpS4 Decreased horseradish peroxidase protein expression sp   16452979
Candida albicans phagocytosis (1) RpS4 none np   16336044
Influenza replication RpS4 Decreased Influenza replication -2.21/-2.78   18615016
Lipid storage RpS4 Smaller sized lipid droplets, more dispersed strong   18408709
Combinatorial effect with methyl methanesulphonate (2) RpS4 Synthetic lethal with methyl methanesulphonate sp   19543366
Muscle morphogenesis and function (1) RpS4 Lethal np   20220848
Muscle morphogenesis and function (1) RpS4 Lethal np   20220848
Muscle morphogenesis and function (2) RpS4 Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Muscle morphogenesis and function (3) RpS4 Split myofibril, fading Z-line np   20220848
Heat nociception (1) RpS4 Developmentally lethal 0.12   21074052
Heart development and function (1) RpS4 Larval lethal 0.17   20371351
Serratia marcescens infection (1) RpS4 none -0.851851851851851   19520911
Notch pathway regulation (4) RpS4 Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) RpS4 Completely lethal (pupal) sp   19363474
Hh pathway regulation RpS4 Downregulation of Hh pathway -0.596155047395357   17903264
Hh pathway regulation RpS4 Downregulation of Hh pathway -0.576824082030082   17903264
Adiposity regulation (1) RpS4 none -0.315   20074523
RTK-Ras-ERK pathway regulation (1) RpS4 none 0.16 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) RpS4 Decreased ERK phosphorylation after EGF stimulation -3.77 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS4 none 1.26 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpS4 Increased ERK phosphorylation after sSpitz and EGF stimulation 3.2 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation RpS4 none 0.06   23263283

0 Submissions