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Gene : su(f) D. melanogaster

DB identifier  ? FBgn0003559 Secondary Identifier  ? CG17170
Name  ? suppressor of forked Source  FlyBase
  • synonyms:
  • CstF-77,
  • l(1)R-9-18,
  • section 19,
  • l(1)3DES,
  • 28,
  • EC235,
  • SU-f,
  • 29,
  • section 29,
  • CstF77,
  • lethal3Des,
  • 3-DES,
  • l(1)su(f),
  • R-9-18,
  • l(1)X3,
  • l(1)G0393,
  • FBgn0028293,
  • section 28,
  • su[+]-f,
  • CG17170,
  • 3DES,
  • FBgn0003559,
  • l(1)EC235,
  • 19,
  • l(1)20Eb,
  • FBan0017170,
  • l(1)X1,
  • R9-18,
  • Su(f),
  • l3DES

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55 Alleles

DB identifier Symbol Allele Class Organism
FBal0263612 su(f)[GD9303]   Drosophila melanogaster
FBal0281879 su(f)[MI07412]   Drosophila melanogaster
FBal0241449 su(f)[P.T:Ecol\lacZ]   Drosophila melanogaster
FBal0281320 su(f)[GLC01462]   Drosophila melanogaster
FBal0260036 su(f)[KK115482]   Drosophila melanogaster
FBal0051076 su(f)[231]   Drosophila melanogaster
FBal0051077 su(f)[207]   Drosophila melanogaster
FBal0100285 su(f)[G0393]   Drosophila melanogaster
FBal0016287 su(f)[23]   Drosophila melanogaster
FBal0016289 su(f)[25]   Drosophila melanogaster
FBal0016290 su(f)[26]   Drosophila melanogaster
FBal0051079 su(f)[127]   Drosophila melanogaster
FBal0016291 su(f)[27]   Drosophila melanogaster
FBal0016292 su(f)[28]   Drosophila melanogaster
FBal0051078 su(f)[138]   Drosophila melanogaster
FBal0217614 su(f)[MB05229]   Drosophila melanogaster
FBal0284841 su(f)[MI08254]   Drosophila melanogaster
FBal0016276 su(f)[11]   Drosophila melanogaster
FBal0050584 su(f)[+t6.4]   Drosophila melanogaster
FBal0050585 su(f)[+tWG8]   Drosophila melanogaster
FBal0050587 su(f)[WP10]   Drosophila melanogaster
FBal0056016 su(f)[94]   Drosophila melanogaster
FBal0050586 su(f)[16-185]   Drosophila melanogaster
FBal0094319 su(f)[WP24]   Drosophila melanogaster
FBal0094320 su(f)[WP13]   Drosophila melanogaster
FBal0016272 su(f)[7]   Drosophila melanogaster
FBal0189636 su(f)[+]   Drosophila melanogaster
FBal0016266 su(f)[1]   Drosophila melanogaster
FBal0016288 su(f)[24]   Drosophila melanogaster
FBal0016271 su(f)[6]   Drosophila melanogaster

158 Clones

Secondary Identifier DB identifier
LD38348 FBcl0360203
GH16848 FBcl0360201
SD14665 FBcl0360202
RP004227769 FBcl0701420
RP004519109 FBcl0701421
RP004136392 FBcl0701422
RP004503429 FBcl0701423
RP004199901 FBcl0701424
RP004416597 FBcl0701425
RP004366725 FBcl0701426
RP004075798 FBcl0701427
RP004251514 FBcl0701428
RP004202728 FBcl0701429
RP004017407 FBcl0701430
RP004066669 FBcl0701431
RP004461187 FBcl0701432
RP004175622 FBcl0701433
RP004332493 FBcl0701434
RP004032187 FBcl0701435
RP004032031 FBcl0701481
RP004268009 FBcl0701436
RP004265801 FBcl0701437
RP004054226 FBcl0701438
RP004144856 FBcl0701439
RP004480485 FBcl0701440
RP004531721 FBcl0701441
RP004241076 FBcl0701442
RP004070429 FBcl0701443
RP004464703 FBcl0701444
RP004234791 FBcl0701445

13 Exons

DB identifier Symbol
FBgn0003559:2 su(f):2
FBgn0003559:4 su(f):4
FBgn0003559:5 su(f):5
FBgn0003559:6 su(f):6
FBgn0003559:8 su(f):8
FBgn0003559:9 su(f):9
FBgn0003559:10 su(f):10
FBgn0003559:11 su(f):11
FBgn0003559:12 su(f):12
FBgn0003559:7 su(f):7
FBgn0003559:13 su(f):13
FBgn0003559:1 su(f):1
FBgn0003559:3 su(f):3

3 Transcripts

DB identifier Gene
FBtr0306544 su(f)
FBtr0113733 su(f)
FBtr0306545 su(f)

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0113733-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0306544-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0306545-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0113733-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0306544-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0306545-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3354994 NCBI Entrez Gene identifiers FBgn0003559
78119 BioGRID FBgn0003559

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 853.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 953.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 994.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1007.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 782.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 849.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1739.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1266.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 593.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1424.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1563.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 532.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1421.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 624.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1071.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 718.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1350.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1258.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1329.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1202.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 807.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1271.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1125.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 678.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1108.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 901.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1054.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1262.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 907.0
FBgn0003559 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 684.0

13 Introns

DB identifier
Organism . Name
intron_FBgn0003559:2_FBgn0003559:4 Drosophila melanogaster
intron_FBgn0003559:4_FBgn0003559:5 Drosophila melanogaster
intron_FBgn0003559:5_FBgn0003559:6 Drosophila melanogaster
intron_FBgn0003559:6_FBgn0003559:8 Drosophila melanogaster
intron_FBgn0003559:8_FBgn0003559:9 Drosophila melanogaster
intron_FBgn0003559:9_FBgn0003559:10 Drosophila melanogaster
intron_FBgn0003559:10_FBgn0003559:11 Drosophila melanogaster
intron_FBgn0003559:11_FBgn0003559:12 Drosophila melanogaster
intron_FBgn0003559:5_FBgn0003559:7 Drosophila melanogaster
intron_FBgn0003559:7_FBgn0003559:8 Drosophila melanogaster
intron_FBgn0003559:11_FBgn0003559:13 Drosophila melanogaster
intron_FBgn0003559:1_FBgn0003559:3 Drosophila melanogaster
intron_FBgn0003559:3_FBgn0003559:4 Drosophila melanogaster

13 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage su(f) none -1.202050178   19067489
Lipid storage su(f) none 0.226412181   19067489
ERK signaling su(f) ERK activation reduced weak   17086199
Cell size and cell-cycle regulation (1) su(f) none sp   16496002
Muscle morphogenesis and function (1) su(f) none np   20220848
Heat nociception (1) su(f) none -0.14   21074052
Notch pathway regulation (4) su(f) Completely lethal (before pupal) sp   19363474
Pol II elongation su(f) none 76 20 min heat shock 19279664
RTK-Ras-ERK pathway regulation (1) su(f) none -0.37 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) su(f) none 1.49 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) su(f) none -0.03 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) su(f) none 0 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation su(f) none -1.78   23263283

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