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Gene : Rim D. melanogaster

DB identifier  ? FBgn0053547 Secondary Identifier  ? CG33547
Name  ? Rab3 interacting molecule Source  FlyBase
  • synonyms:
  • FBtr0083520,
  • CG7301,
  • CG7321,
  • dm-Rim,
  • FBan0007305,
  • FBgn0053547,
  • FBtr0083521,
  • FBpp0082945,
  • UNC-10/RIM,
  • CG33547,
  • FBpp0082944,
  • FBgn0038557,
  • CG7305,
  • FBgn0038556,
  • RIM,
  • DmRIM,
  • FBan0007301,
  • FBan0007321,
  • FBgn0038559

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18 Alleles

DB identifier Symbol Allele Class Organism
FBal0281025 Rim[MI07142]   Drosophila melanogaster
FBal0280328 Rim[Scer\UAS.cGa]   Drosophila melanogaster
FBal0280329 Rim[Scer\UAS.T:Avic\GFP-EGFP]   Drosophila melanogaster
FBal0280330 Rim[Ex73]   Drosophila melanogaster
FBal0280331 Rim[Ex98]   Drosophila melanogaster
FBal0181880 Rim[EY12862]   Drosophila melanogaster
FBal0181878 Rim[f03825]   Drosophila melanogaster
FBal0181879 Rim[c03812]   Drosophila melanogaster
FBal0159889 Rim[EY05246]   Drosophila melanogaster
FBal0159890 Rim[C165]   Drosophila melanogaster
FBal0217655 Rim[MB07541]   Drosophila melanogaster
FBal0287816 Rim[103]   Drosophila melanogaster
FBal0264453 Rim[MI03470]   Drosophila melanogaster
FBal0239310 Rim[JF02610]   Drosophila melanogaster
FBal0208302 Rim[GD15273]   Drosophila melanogaster
FBal0214731 Rim[GD6194]   Drosophila melanogaster
FBal0275516 Rim[NIG.7305R]   Drosophila melanogaster
FBal0275523 Rim[NIG.7321R]   Drosophila melanogaster

53 Clones

Secondary Identifier DB identifier
EK041252 FBcl0062816
EK015822 FBcl0063480
EK271916 FBcl0063516
EK239716 FBcl0063586
EK053048 FBcl0063590
EK029134 FBcl0063628
EK054326 FBcl0063634
EK260855 FBcl0063648
EK132123 FBcl0063654
EK184340 FBcl0063684
EK179846 FBcl0063688
EP13835 FBcl0074595
EP10218 FBcl0074597
EP18430 FBcl0074603
GH24680 FBcl0117247
GH26867 FBcl0119659
HL04766 FBcl0149697
HL03728 FBcl0149703
HL02581 FBcl0149704
RH30260 FBcl0257289
RH42808 FBcl0257380
RH43803 FBcl0257390
RH48143 FBcl0257406
RH48464 FBcl0257409
RH01662 FBcl0257427
RH43413 FBcl0257431
RH17252 FBcl0257434
RH52589 FBcl0257441
RH17110 FBcl0257446
RH61708 FBcl0257456

32 Exons

DB identifier Symbol
FBgn0053547:23 Rim:23
FBgn0053547:32 Rim:32
FBgn0053547:31 Rim:31
FBgn0053547:30 Rim:30
FBgn0053547:29 Rim:29
FBgn0053547:28 Rim:28
FBgn0053547:27 Rim:27
FBgn0053547:26 Rim:26
FBgn0053547:24 Rim:24
FBgn0053547:22 Rim:22
FBgn0053547:21 Rim:21
FBgn0053547:20 Rim:20
FBgn0053547:19 Rim:19
FBgn0053547:18 Rim:18
FBgn0053547:17 Rim:17
FBgn0053547:16 Rim:16
FBgn0053547:15 Rim:15
FBgn0053547:14 Rim:14
FBgn0053547:11 Rim:11
FBgn0053547:10 Rim:10
FBgn0053547:8 Rim:8
FBgn0053547:7 Rim:7
FBgn0053547:6 Rim:6
FBgn0053547:3 Rim:3
FBgn0053547:2 Rim:2
FBgn0053547:5 Rim:5
FBgn0053547:4 Rim:4
FBgn0053547:12 Rim:12
FBgn0053547:9 Rim:9
FBgn0053547:1 Rim:1

14 Transcripts

DB identifier Gene
FBtr0305016 Rim
FBtr0336721 Rim
FBtr0336720 Rim
FBtr0336719 Rim
FBtr0336718 Rim
FBtr0305021 Rim
FBtr0336717 Rim
FBtr0308498 Rim
FBtr0336713 Rim
FBtr0336716 Rim
FBtr0336714 Rim
FBtr0336722 Rim
FBtr0336715 Rim
FBtr0336723 Rim

28 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0336713-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336714-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336715-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336716-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336717-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336718-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336719-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336720-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336721-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336722-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0336723-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308498-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0305016-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0305021-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336713-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336714-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336715-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336716-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336717-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336718-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336719-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336720-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336721-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336722-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0336723-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0308498-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0305016-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0305021-3-prime-utr Drosophila melanogaster

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45 Pathways

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
42150 NCBI Entrez Gene identifiers FBgn0053547

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 489.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 395.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 440.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 473.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 269.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 270.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 243.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 231.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 230.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 227.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 387.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 198.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 600.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1255.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 272.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 461.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 244.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 263.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 412.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 319.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 288.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 188.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 214.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 148.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 321.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 480.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 327.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 344.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 211.0
FBgn0053547 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 286.0

41 Introns

DB identifier
Organism . Name
intron_FBgn0053547:32_FBgn0053547:31 Drosophila melanogaster
intron_FBgn0053547:31_FBgn0053547:30 Drosophila melanogaster
intron_FBgn0053547:30_FBgn0053547:29 Drosophila melanogaster
intron_FBgn0053547:29_FBgn0053547:28 Drosophila melanogaster
intron_FBgn0053547:28_FBgn0053547:27 Drosophila melanogaster
intron_FBgn0053547:27_FBgn0053547:26 Drosophila melanogaster
intron_FBgn0053547:26_FBgn0053547:24 Drosophila melanogaster
intron_FBgn0053547:24_FBgn0053547:23 Drosophila melanogaster
intron_FBgn0053547:23_FBgn0053547:22 Drosophila melanogaster
intron_FBgn0053547:22_FBgn0053547:21 Drosophila melanogaster
intron_FBgn0053547:21_FBgn0053547:20 Drosophila melanogaster
intron_FBgn0053547:20_FBgn0053547:19 Drosophila melanogaster
intron_FBgn0053547:19_FBgn0053547:18 Drosophila melanogaster
intron_FBgn0053547:18_FBgn0053547:17 Drosophila melanogaster
intron_FBgn0053547:17_FBgn0053547:16 Drosophila melanogaster
intron_FBgn0053547:16_FBgn0053547:15 Drosophila melanogaster
intron_FBgn0053547:15_FBgn0053547:12 Drosophila melanogaster
intron_FBgn0053547:12_FBgn0053547:11 Drosophila melanogaster
intron_FBgn0053547:11_FBgn0053547:10 Drosophila melanogaster
intron_FBgn0053547:10_FBgn0053547:8 Drosophila melanogaster
intron_FBgn0053547:8_FBgn0053547:7 Drosophila melanogaster
intron_FBgn0053547:7_FBgn0053547:6 Drosophila melanogaster
intron_FBgn0053547:6_FBgn0053547:1 Drosophila melanogaster
intron_FBgn0053547:24_FBgn0053547:17 Drosophila melanogaster
intron_FBgn0053547:6_FBgn0053547:2 Drosophila melanogaster
intron_FBgn0053547:11_FBgn0053547:9 Drosophila melanogaster
intron_FBgn0053547:9_FBgn0053547:8 Drosophila melanogaster
intron_FBgn0053547:26_FBgn0053547:25 Drosophila melanogaster
intron_FBgn0053547:25_FBgn0053547:23 Drosophila melanogaster
intron_FBgn0053547:7_FBgn0053547:5 Drosophila melanogaster

37 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Rim none -0.490307568   19067489
Lipid storage Rim none -0.143997574   19067489
Lipid storage Rim none -0.623391861   19067489
Lipid storage Rim none -1.884424962   19067489
Lipid storage Rim none -0.493853329   19067489
Lipid storage Rim none -0.207450692   19067489
Lipid storage Rim none -0.099160456   19067489
Lipid storage Rim none 0.984260115   19067489
Lipid storage Rim none 0.315524534   19067489
Lipid storage Rim none 0.11119852   19067489
ERK signaling Rim ERK activation increased weak   17086199
Hedgehog signaling Rim Decreased Hedgehog reporter activity -2.57   16311596
Constitutive protein secretion and Golgi organization (1) Rim Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) Rim none sp   16496002
Muscle morphogenesis and function (1) Rim none np   20220848
Muscle morphogenesis and function (1) Rim none np   20220848
Heat nociception (1) Rim none 2.34   21074052
Heat nociception (1) Rim none -1.17   21074052
Heat nociception (1) Rim none 0.38   21074052
Heat nociception (1) Rim none 2.34   21074052
Heart development and function (1) Rim none 1   20371351
Heart development and function (1) Rim none 1   20371351
Heart development and function (1) Rim none 1   20371351
Heart development and function (2) Rim none 2.96   20371351
Notch pathway regulation (4) Rim none 0   19363474
Notch pathway regulation (4) Rim none 0   19363474
Hh pathway regulation Rim none -0.0336365233954841   17903264
Hh pathway regulation Rim none 0.0312467296396043   17903264
RTK-Ras-ERK pathway regulation (1) Rim none -0.23 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Rim none 0.51 10 minutes EGF stimulation 22028469

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