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Gene : ci D. melanogaster
DB identifier  ? FBgn0004859 Secondary Identifier  ? CG2125
Name  ? cubitus interruptus Source  FlyBase
  • synonyms:
  • FBgn0017411,
  • FBgn0000315,
  • Cubitis Interruptus,
  • Siah,
  • Gli,
  • CG2125,
  • Ci[D],
  • l(4)17,
  • l(4)102ABc,
  • FBgn0019831,
  • CI,
  • FBgn0000314,
  • FBan0002125,
  • cubitus-interruptus-Dominant,
  • Cubitus Interruptus,
  • l(4)13,
  • CID,
  • Ce,
  • Ci/GLI,
  • Cubitus Interuptus,
  • Cell,
  • Cubitus-interruptus,
  • ci-D,
  • FBgn0010154,
  • FBgn0010155,
  • Ci155,
  • FBgn0004859
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Lists
This Gene is in 2 lists:
Fly classII (760)
Fly classIIa (147)

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

216 Alleles

DB identifier Symbol Allele Class Organism
FBal0120528 ci[GA2.Scer\UAS.T:Ivir\HA1,T:Scer\GAL4]   Drosophila melanogaster
FBal0120529 ci[GA1.Scer\UAS.T:Ivir\HA1,T:Scer\GAL4]   Drosophila melanogaster
FBal0120531 ci[DeltaNC1.Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0120532 ci[DeltaN2.Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0120533 ci[DeltaN1.Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0130460 ci[DeltaNC2.Scer\UAS.T:Ivir\HA1]   Drosophila melanogaster
FBal0212186 ci[Act5C.PN]   Drosophila melanogaster
FBal0282908 ci[S849A.Scer\UAS]   Drosophila melanogaster
FBal0180476 ci[1482]   Drosophila melanogaster
FBal0240324 ci[JF01715]   Drosophila melanogaster
FBal0285989 ci[YD1062]   Drosophila melanogaster
FBal0245563 ci[JF01271]   Drosophila melanogaster
FBal0245564 ci[JF01272]   Drosophila melanogaster
FBal0245933 ci[JF01744]   Drosophila melanogaster
FBal0175735 ci[E1]   Drosophila melanogaster
FBal0030756 ci[DRP]   Drosophila melanogaster
FBal0001644 ci[1]   Drosophila melanogaster
FBal0030757 ci[Dplac]   Drosophila melanogaster
FBal0175734 ci[E2]   Drosophila melanogaster
FBal0240618 ci[P1X3.Scer\UAS.W.T:Ivir\HA1]   Drosophila melanogaster
FBal0257006 ci[NIG.2125R]   Drosophila melanogaster
FBal0001645 ci[36]   Drosophila melanogaster
FBal0001656 ci[Ce-1]   Drosophila melanogaster
FBal0001653 ci[W] gain of function allele Drosophila melanogaster
FBal0117567 ci[2-M1021.R]   Drosophila melanogaster
FBal0119295 ci[n]   Drosophila melanogaster
FBal0147226 ci[KG05811]   Drosophila melanogaster
FBal0285883 ci[DeltaCDN.Scer\UAS.T:Zzzz\FLAG,T:Ivir\HA1,T:Hsap\MYC]   Drosophila melanogaster
FBal0285884 ci[DeltaCORD.Scer\UAS.T:Zzzz\FLAG,T:Ivir\HA1,T:Hsap\MYC]   Drosophila melanogaster
FBal0285885 ci[DeltaCDN.CORD.Scer\UAS.T:Zzzz\FLAG,T:Ivir\HA1,T:Hsap\MYC]   Drosophila melanogaster

103 Clones

Secondary Identifier DB identifier
EK304003 FBcl0052686
EK167151 FBcl0052700
EK051563 FBcl0052802
EK102221 FBcl0052824
EK015454 FBcl0052836
EK184906 FBcl0052866
EK153517 FBcl0052876
EK113546 FBcl0052912
EK122651 FBcl0052982
EK137923 FBcl0052992
EK146925 FBcl0052998
EK211532 FBcl0053008
EK121226 FBcl0053028
EK181736 FBcl0053044
EK148418 FBcl0053054
EK048455 FBcl0053066
EK040559 FBcl0053110
EK062111 FBcl0053118
EK256821 FBcl0053130
EK196445 FBcl0053152
EK128948 FBcl0053164
EK188018 FBcl0053170
EK155804 FBcl0053180
EK049160 FBcl0053190
EK214614 FBcl0053224
EK295633 FBcl0053234
EK063860 FBcl0053242
EK269803 FBcl0053258
EK198511 FBcl0053290
EK183655 FBcl0053302

8 Exons

DB identifier Symbol
FBgn0004859:7 ci:7
FBgn0004859:6 ci:6
FBgn0004859:5 ci:5
FBgn0004859:4 ci:4
FBgn0004859:2 ci:2
FBgn0004859:1 ci:1
FBgn0004859:8 ci:8
FBgn0004859:3 ci:3

3 Transcripts

DB identifier Gene
FBtr0306168 ci
FBtr0089178 ci
FBtr0308074 ci

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089178-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0308074-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0306168-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089178-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0308074-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0306168-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
43767 NCBI Entrez Gene identifiers FBgn0004859
68605 BioGRID FBgn0004859

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from UniProt  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 718.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 442.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1018.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1083.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 956.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 219.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 226.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 50.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 19.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 17.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1953.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 2765.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1852.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1136.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 5673.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2205.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 2033.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1367.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 2299.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1887.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2618.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 328.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2259.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 42.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1051.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 259.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2529.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 4776.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 3435.0
FBgn0004859 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2751.0

8 Introns

DB identifier
Organism . Name
intron_FBgn0004859:8_FBgn0004859:6 Drosophila melanogaster
intron_FBgn0004859:6_FBgn0004859:5 Drosophila melanogaster
intron_FBgn0004859:5_FBgn0004859:4 Drosophila melanogaster
intron_FBgn0004859:4_FBgn0004859:3 Drosophila melanogaster
intron_FBgn0004859:3_FBgn0004859:1 Drosophila melanogaster
intron_FBgn0004859:7_FBgn0004859:6 Drosophila melanogaster
intron_FBgn0004859:4_FBgn0004859:2 Drosophila melanogaster
intron_FBgn0004859:2_FBgn0004859:1 Drosophila melanogaster

12 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage ci none 0.802555998   19067489
Lipid storage ci none 0.275980971   19067489
Hedgehog signaling ci Decreased Hedgehog reporter activity -3.38   16311596
Cell size and cell-cycle regulation (1) ci none sp   16496002
Dendrite pattern formation ci Decreased cell number np   16547170
Heart development and function (1) ci none 1   20371351
Hh pathway regulation ci Downregulation of Hh pathway -0.816641671712395   17903264
Hh pathway regulation ci Downregulation of Hh pathway -0.758670187472167   17903264
Blood cell homeostasis regulation (1) ci none np   20540764
Blood cell homeostasis regulation (2) ci none np   20540764
Hippo pathway regulation ci none 2.7   23263283
Glycosylation regulation (1) ci none sp   21203496

0 Submissions





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