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Gene : RpL38 D. melanogaster

DB identifier  ? FBgn0040007 Secondary Identifier  ? CG18001
Name  ? Ribosomal protein L38 Source  FlyBase
  • synonyms:
  • CG18001,
  • l(2)41Ag,
  • FBgn0040007,
  • FBgn0002066,
  • FBgn0002601,
  • BcDNA:RE42506,
  • M(2)41A,
  • FBgn0013538,
  • FBan0018001,
  • Enhancer on chromosome 2, complementation group b,
  • M(2)S2,
  • l(2)41Ai,
  • l(2)EMS4-72,
  • FBgn0020393,
  • Rp L38,
  • E-2b,
  • Nipped,
  • Minute(2)41A,
  • l(2R)A',
  • GroupIV,
  • 41Ag,
  • M(2)S3,
  • Ribosomal protein 38,
  • lethal(2)41Af,
  • FBgn0061397,
  • l(2)41Af,
  • FBgn0058278,
  • 41Af,
  • l(2)EMS45-72,
  • CG40278

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11 Alleles

DB identifier Symbol Allele Class Organism
FBal0263608 RpL38[GD13653]   Drosophila melanogaster
FBal0268401 RpL38[dsRNA.WIZ.Scer\UAS]   Drosophila melanogaster
FBal0181800 RpL38[P3]   Drosophila melanogaster
FBal0181801 RpL38[KPL1]   Drosophila melanogaster
FBal0181803 RpL38[2b1]   Drosophila melanogaster
FBal0181802 RpL38[2b2]   Drosophila melanogaster
FBal0048867 RpL38[unspecified]   Drosophila melanogaster
FBal0009006 RpL38[45-72] loss of function allele Drosophila melanogaster
FBal0150415 RpL38[NC21]   Drosophila melanogaster
FBal0287028 RpL38[Scer\UAS.ORF]   Drosophila melanogaster
FBal0287029 RpL38[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster

189 Clones

Secondary Identifier DB identifier
UUGC0714 FBcl0003823
EK223256 FBcl0026806
EK230724 FBcl0026820
EK223220 FBcl0026824
EK139449 FBcl0026832
EK243953 FBcl0026848
EK198539 FBcl0026922
EC33551 FBcl0067679
EC24034 FBcl0067733
EC37314 FBcl0067739
EC30770 FBcl0067743
EC13526 FBcl0067747
EC22752 FBcl0067749
EC37277 FBcl0067751
EC40474 FBcl0067753
EC41731 FBcl0067757
EC32526 FBcl0067765
EC13064 FBcl0067777
EC17378 FBcl0067781
EC31478 FBcl0067831
EC24356 FBcl0067837
EC24437 FBcl0067839
EC17528 FBcl0067841
EC37628 FBcl0067857
EC01290 FBcl0067861
EC37661 FBcl0067863
EC33148 FBcl0067865
EK207563 FBcl0068554
EK086341 FBcl0068630
EK194351 FBcl0068650

3 Exons

DB identifier Symbol
FBgn0040007:3 RpL38:3
FBgn0040007:2 RpL38:2
FBgn0040007:1 RpL38:1

2 Transcripts

DB identifier Gene
FBtr0111120 RpL38
FBtr0334985 RpL38

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0334985-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0111120-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334985-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111120-3-prime-utr Drosophila melanogaster

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49 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3355144 NCBI Entrez Gene identifiers FBgn0040007
78269 BioGRID FBgn0040007

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 3717.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 4578.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 4581.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 6110.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 4343.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 8648.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2016.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2418.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 7195.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1882.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 4258.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 5567.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 3032.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 3200.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 3242.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 3062.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1871.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2108.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 4545.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 4523.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2567.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 3046.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2423.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1062.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1651.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1906.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1932.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1147.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 4069.0
FBgn0040007 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2306.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0040007:3_FBgn0040007:2 Drosophila melanogaster
intron_FBgn0040007:3_FBgn0040007:1 Drosophila melanogaster

26 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RpL38 Increased lipid droplet area 4.115972571   19067489
Lipid storage RpL38 Increased lipid droplet area 4.935064603   19067489
ERK signaling RpL38 ERK activation reduced weak   17086199
Drosophila C virus infection RpL38 Drosophila C virus replication down np   17040126
Intracellular Listeria monocytogenes infection RpL38 Increased GFP protein expression strong   16020693
Drosophila C virus infection RpL38 Drosophila C virus infection reduced np   15713840
Hedgehog signaling RpL38 Decreased Hedgehog reporter activity -3.63   16311596
Constitutive protein secretion and Golgi organization (1) RpL38 Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) RpL38 Decreased viability sp   16496002
Cell size and cell-cycle regulation (2) RpL38 Decreased viability 0.556   16496002
Cell size and cell-cycle regulation (3) RpL38 Decreased cell number 405   16496002
Cell size and cell-cycle regulation (4) RpL38 Increased number of mitotic cells 0.9   16496002
Muscle morphogenesis and function (1) RpL38 Lethal np   20220848
Muscle morphogenesis and function (3) RpL38 none np   20220848
Heat nociception (1) RpL38 none -0.36   21074052
Serratia marcescens infection (1) RpL38 none 0.329896907216494   19520911
Notch pathway regulation (4) RpL38 Completely lethal (before pupal) sp   19363474
Hh pathway regulation RpL38 Downregulation of Hh pathway -0.639606576822036   17903264
Hh pathway regulation RpL38 Downregulation of Hh pathway -0.511618636928666   17903264
Notch pathway regulation (1) RpL38 Downregulation of Notch pathway np   20493818
Adiposity regulation (1) RpL38 none -0.299   20074523
RTK-Ras-ERK pathway regulation (1) RpL38 none -0.26 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) RpL38 Decreased ERK phosphorylation after EGF stimulation -4.07 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpL38 none 0.84 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RpL38 none 1.45 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation RpL38 Upregulation of Hippo pathway -3.05   23263283

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