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Gene : RnpS1 D. melanogaster

DB identifier  ? FBgn0037707 Secondary Identifier  ? CG16788
Name  ? RNA-binding protein S1 Source  FlyBase
  • synonyms:
  • CG16788,
  • FBgn0037707,
  • DEK,
  • RRM-domain protein,
  • RNPS1,
  • FBan0016788

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13 Alleles

DB identifier Symbol Allele Class Organism
FBal0266240 RnpS1[GL00540]   Drosophila melanogaster
FBal0181853 RnpS1[c02910]   Drosophila melanogaster
FBal0123305 RnpS1[EP1082]   Drosophila melanogaster
FBal0150651 RnpS1[dsRNA.cGa]   Drosophila melanogaster
FBal0261317 RnpS1[CPTI004245]   Drosophila melanogaster
FBal0261318 RnpS1[CPTI004189]   Drosophila melanogaster
FBal0261319 RnpS1[CPTI004270]   Drosophila melanogaster
FBal0261320 RnpS1[CPTI004278]   Drosophila melanogaster
FBal0286809 RnpS1[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286810 RnpS1[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0208311 RnpS1[GD9206]   Drosophila melanogaster
FBal0231046 RnpS1[KK101060]   Drosophila melanogaster
FBal0272415 RnpS1[NIG.16788R]   Drosophila melanogaster

22 Clones

Secondary Identifier DB identifier
DPiM_LD23870 FBcl0741933
EK251315 FBcl0031376
bs01h10 FBcl0046695
EK186434 FBcl0140858
EK190961 FBcl0140876
LD31801 FBcl0163509
LD36648 FBcl0163526
LD26185 FBcl0163775
LD35117 FBcl0163899
LD41527 FBcl0163910
LD23882 FBcl0163936
LD35921 FBcl0163955
LD23870 FBcl0164348
LD46757 FBcl0164902
RE38749 FBcl0192405
RE04757 FBcl0193820
RE22395 FBcl0194234
RE06821 FBcl0196466
RH04190 FBcl0242127
RH43833 FBcl0242711
EC053786 FBcl0299555
Dmel_dig_010356_0618_2761 FBcl0368333

3 Exons

DB identifier Symbol
FBgn0037707:1 RnpS1:1
FBgn0037707:2 RnpS1:2
FBgn0037707:3 RnpS1:3

1 Transcripts

DB identifier Gene
FBtr0082066 RnpS1

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0082066-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0082066-3-prime-utr Drosophila melanogaster

Interactions

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
41147 NCBI Entrez Gene identifiers FBgn0037707
66306 BioGRID FBgn0037707

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1284.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1488.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 510.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 727.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1226.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 762.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 897.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1108.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 882.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 975.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 842.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 698.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1125.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 850.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 804.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 626.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 857.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 906.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1206.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1079.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1185.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1048.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 938.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 915.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 719.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2153.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2363.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2325.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2076.0
FBgn0037707 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1862.0

2 Introns

DB identifier
Organism . Name
intron_FBgn0037707:1_FBgn0037707:2 Drosophila melanogaster
intron_FBgn0037707:2_FBgn0037707:3 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage RnpS1 none -0.094920712   19067489
Lipid storage RnpS1 none -0.621077643   19067489
Alternative splicing RnpS1 none sp   15492211
Cell size and cell-cycle regulation (1) RnpS1 none sp   16496002
Cell size and cell-cycle regulation (1) RnpS1 none sp   16496002
Candida albicans phagocytosis (1) RnpS1 none np   16336044
Influenza replication RnpS1 Decreased Influenza replication -2.88/-2.01   18615016
Combinatorial effect with methyl methanesulphonate (1) RnpS1 none sp   19543366
Heat nociception (1) RnpS1 none 0.77   21074052
Heart development and function (1) RnpS1 none 1   20371351
Blood cell homeostasis regulation (1) RnpS1 none np   20540764
Blood cell homeostasis regulation (2) RnpS1 none np   20540764
RTK-Ras-ERK pathway regulation (1) RnpS1 Increased ERK phosphorylation after EGF stimulation 1.51 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) RnpS1 none 0.87 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RnpS1 none -0.39 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) RnpS1 none 0.14 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation RnpS1 none -1.83   23263283
Glycosylation regulation (1) RnpS1 none sp   21203496

0 Submissions