Genomics
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13 Alleles
DB identifier | Symbol | Allele Class | Organism |
---|---|---|---|
FBal0266240 | RnpS1[GL00540] | Drosophila melanogaster | |
FBal0181853 | RnpS1[c02910] | Drosophila melanogaster | |
FBal0123305 | RnpS1[EP1082] | Drosophila melanogaster | |
FBal0150651 | RnpS1[dsRNA.cGa] | Drosophila melanogaster | |
FBal0261317 | RnpS1[CPTI004245] | Drosophila melanogaster | |
FBal0261318 | RnpS1[CPTI004189] | Drosophila melanogaster | |
FBal0261319 | RnpS1[CPTI004270] | Drosophila melanogaster | |
FBal0261320 | RnpS1[CPTI004278] | Drosophila melanogaster | |
FBal0286809 | RnpS1[Scer\UAS.ORF] | Drosophila melanogaster | |
FBal0286810 | RnpS1[Scer\UAS.ORF.T:Ivir\HA1] | Drosophila melanogaster | |
FBal0208311 | RnpS1[GD9206] | Drosophila melanogaster | |
FBal0231046 | RnpS1[KK101060] | Drosophila melanogaster | |
FBal0272415 | RnpS1[NIG.16788R] | Drosophila melanogaster |
22 Clones
2 UTRs
Class | DB identifier |
Organism . Name |
---|---|---|
FivePrimeUTR | FBtr0082066-5-prime-utr | Drosophila melanogaster |
ThreePrimeUTR | FBtr0082066-3-prime-utr | Drosophila melanogaster |
Other
29 Pathways
- Processing of Capped Intron-Containing Pre-mRNA,
- RNA Polymerase II Transcription Elongation,
- Transcription,
- RNA Polymerase II Transcription,
- Gene Expression,
- Metabolism of mRNA,
- mRNA 3'-end processing,
- Cleavage of Growing Transcript in the Termination Region,
- RNA Polymerase II Promoter Escape,
- RNA Polymerase II Pre-transcription Events,
- RNA Polymerase II Transcription Initiation,
- Transport of Mature Transcript to Cytoplasm,
- RNA Polymerase II Transcription Pre-Initiation And Promoter Opening,
- Transport of Mature mRNA derived from an Intron-Containing Transcript,
- pre-mRNA splicing,
- mRNA Splicing,
- mRNA Processing,
- Post-Elongation Processing of the Transcript,
- Nonsense-Mediated Decay,
- Metabolism of RNA,
- Formation of the Early Elongation Complex,
- RNA Polymerase II Transcription Initiation And Promoter Clearance,
- RNA Polymerase II Transcription Termination,
- mRNA Capping,
- Formation of RNA Pol II elongation complex,
- RNA Pol II CTD phosphorylation and interaction with CE,
- Post-Elongation Processing of Intron-Containing pre-mRNA,
- Elongation arrest and recovery,
- Nonsense Mediated Decay Enhanced by the Exon Junction Complex
2 Cross References
Identifier |
Source . Name |
Subject . Primary Identifier |
---|---|---|
41147 | NCBI Entrez Gene identifiers | FBgn0037707 |
66306 | BioGRID | FBgn0037707 |
11 Data Sets
Name | URL |
---|---|
FlyBase data set for Drosophila melanogaster | |
TrEMBL data set | http://www.ebi.ac.uk/trembl/ |
Drosophila 12 Genomes Consortium homology | |
GenomeRNAi data set | |
TreeFam data set | |
Panther data set | |
IntAct interactions data set | |
BioGRID interaction data set | http://www.thebiogrid.org/downloads.php |
GO Annotation from FlyBase | |
FlyBase fasta data set for Drosophila melanogaster | |
Drosophila Cell Line and Developmental Stage Gene and Exon Scores |
55 Expression Scores
2 Introns
DB identifier |
Organism . Name |
---|---|
intron_FBgn0037707:1_FBgn0037707:2 | Drosophila melanogaster |
intron_FBgn0037707:2_FBgn0037707:3 | Drosophila melanogaster |
18 RNAi Results
Screen | Gene | Phenotype | Score | Conditions | PubMed ID |
---|---|---|---|---|---|
Lipid storage | RnpS1 | none | -0.094920712 | 19067489 | |
Lipid storage | RnpS1 | none | -0.621077643 | 19067489 | |
Alternative splicing | RnpS1 | none | sp | 15492211 | |
Cell size and cell-cycle regulation (1) | RnpS1 | none | sp | 16496002 | |
Cell size and cell-cycle regulation (1) | RnpS1 | none | sp | 16496002 | |
Candida albicans phagocytosis (1) | RnpS1 | none | np | 16336044 | |
Influenza replication | RnpS1 | Decreased Influenza replication | -2.88/-2.01 | 18615016 | |
Combinatorial effect with methyl methanesulphonate (1) | RnpS1 | none | sp | 19543366 | |
Heat nociception (1) | RnpS1 | none | 0.77 | 21074052 | |
Heart development and function (1) | RnpS1 | none | 1 | 20371351 | |
Blood cell homeostasis regulation (1) | RnpS1 | none | np | 20540764 | |
Blood cell homeostasis regulation (2) | RnpS1 | none | np | 20540764 | |
RTK-Ras-ERK pathway regulation (1) | RnpS1 | Increased ERK phosphorylation after EGF stimulation | 1.51 | 0 minutes EGF stimulation | 22028469 |
RTK-Ras-ERK pathway regulation (1) | RnpS1 | none | 0.87 | 10 minutes EGF stimulation | 22028469 |
RTK-Ras-ERK pathway regulation (2) | RnpS1 | none | -0.39 | 10 minutes sSpitz stimulation | 22028469 |
RTK-Ras-ERK pathway regulation (2) | RnpS1 | none | 0.14 | 30 minutes sSpitz stimulation | 22028469 |
Hippo pathway regulation | RnpS1 | none | -1.83 | 23263283 | |
Glycosylation regulation (1) | RnpS1 | none | sp | 21203496 |