modENCODE |  Help |  blog

Gene : Tbp D. melanogaster
DB identifier  ? FBgn0003687 Secondary Identifier  ? CG9874
Name  ? TATA binding protein Source  FlyBase
  • synonyms:
  • TFIID,
  • FBan0009874,
  • dTFIID,
  • TBP,
  • FBgn0003687,
  • FBgn0013961,
  • CG9874,
  • CG9874-RA,
  • TATA box binding protein,
  • TATA box-binding protein,
  • RBP,
  • FBpp0071596,
  • TATA-box binding protein,
  • CG9874-PA,
  • FBtr0071679,
  • 42kDa polypeptide,
  • dTBP,
  • TATA-binding protein,
  • TBP38,
  • TFIIDtau
Paste the following link
Lists
This Gene is in 2 lists:
example (23)
Fly classI (1496)

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

31 Alleles

DB identifier Symbol Allele Class Organism
FBal0263669 Tbp[Scer\UAS.cRa]   Drosophila melanogaster
FBal0281112 Tbp[GL00726]   Drosophila melanogaster
FBal0258807 Tbp[KK100740]   Drosophila melanogaster
FBal0159680 Tbp[f00190]   Drosophila melanogaster
FBal0181298 Tbp[a.cKa]   Drosophila melanogaster
FBal0058115 Tbp[sI10]   Drosophila melanogaster
FBal0058116 Tbp[sEU4]   Drosophila melanogaster
FBal0058118 Tbp[sBT1]   Drosophila melanogaster
FBal0058125 Tbp[E-3911]   Drosophila melanogaster
FBal0181297 Tbp[cKa]   Drosophila melanogaster
FBal0058114 Tbp[sO12]   Drosophila melanogaster
FBal0058117 Tbp[sC4]   Drosophila melanogaster
FBal0058113 Tbp[sP5a]   Drosophila melanogaster
FBal0058126 Tbp[Act5C.PC]   Drosophila melanogaster
FBal0083470 Tbp[Delta315-320.T:Scer\GAL4]   Drosophila melanogaster
FBal0058128 Tbp[DeltaBgl.Act5C.T:Ivir\HA1]   Drosophila melanogaster
FBal0058127 Tbp[DeltaNde.Act5C.T:Ivir\HA1]   Drosophila melanogaster
FBal0058910 Tbp[1-157.T:Scer\GAL4]   Drosophila melanogaster
FBal0058909 Tbp[1-282.T:Scer\GAL4]   Drosophila melanogaster
FBal0083469 Tbp[163-353.T:Scer\GAL4]   Drosophila melanogaster
FBal0065928 Tbp[Act5C.cHa.T:Ivir\HA1]   Drosophila melanogaster
FBal0042766 Tbp[Act5C.T:Ivir\HA1]   Drosophila melanogaster
FBal0150585 Tbp[Act5C.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0058908 Tbp[fl.T:Scer\GAL4]   Drosophila melanogaster
FBal0049202 Tbp[hs.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0058124 Tbp[MtnA.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0058123 Tbp[R332H.Act5C.T:Ivir\HA1]   Drosophila melanogaster
FBal0058122 Tbp[R332H.MtnA.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0121884 Tbp[T:Ivir\HA1]   Drosophila melanogaster
FBal0194221 Tbp[dsRNA.cWa]   Drosophila melanogaster

27 Clones

Secondary Identifier DB identifier
DPiM_LD44083 FBcl0741033
UUGC0104 FBcl0001195
EK232439 FBcl0044892
EK103821 FBcl0044902
EK014922 FBcl0044910
EK316751 FBcl0044916
EK051032 FBcl0044928
EK303154 FBcl0044940
GM06325 FBcl0141217
LD29033 FBcl0167810
LD44083 FBcl0167812
RE05773 FBcl0205977
RE44855 FBcl0205983
SD25492 FBcl0283065
SD12983 FBcl0283066
SD20813 FBcl0283070
UT01228 FBcl0292701
EC090970 FBcl0302412
IP17711 FBcl0345931
Dmel_dig_007665_0721_0837 FBcl0378763
CK01.14C.H1 FBcl0468115
CK01.86D.A10 FBcl0468141
CK01.169B.F1 FBcl0468172
176081 FBcl0468080
283251 FBcl0468101
106733 FBcl0468157
275289 FBcl0468132

2 Exons

DB identifier Symbol
FBgn0003687:2 Tbp:2
FBgn0003687:1 Tbp:1

1 Transcripts

DB identifier Gene
FBtr0071679 Tbp

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071679-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071679-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

15 Pathways

2 Cross References

Identifier
Source . Name
Subject . Primary Identifier
37476 NCBI Entrez Gene identifiers FBgn0003687
63101 BioGRID FBgn0003687

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 292.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 324.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 100.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 180.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 174.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 251.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 266.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 347.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 362.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 352.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 200.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 223.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 91.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 441.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 354.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 348.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 324.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 210.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 311.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 195.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 217.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 333.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 231.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 239.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 185.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1182.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 437.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 459.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 405.0
FBgn0003687 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 313.0

1 Introns

DB identifier
Organism . Name
intron_FBgn0003687:2_FBgn0003687:1 Drosophila melanogaster

17 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Tbp Increased lipid droplet area 2.919871577   19067489
Lipid storage Tbp Increased lipid droplet area 6.089752582   19067489
Lipid storage Tbp none 0.046733039   19067489
Lipid storage Tbp none 0.028007621   19067489
Wnt signaling Tbp Decreased Wnt reporter activity -1.4   15817814
Constitutive protein secretion and Golgi organization (1) Tbp Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) Tbp none sp   16496002
Dendrite pattern formation Tbp none np   16547170
Combinatorial effect with methyl methanesulphonate (2) Tbp none sp   19543366
Mutant human huntingtin aggregation Tbp Decreased mutant human huntingtin aggregation <= -2   19789644
Pol II elongation Tbp none 102 20 min heat shock 19279664
RTK-Ras-ERK pathway regulation (1) Tbp none 0.1 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Tbp none 1.25 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Tbp none 1.2 10 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Tbp Increased ERK phosphorylation after sSpitz and EGF stimulation 4.54 30 minutes sSpitz stimulation 22028469
Hippo pathway regulation Tbp none 0.16   23263283
Glycosylation regulation (1) Tbp Lethal np   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom