modENCODE |  Help |  blog

Gene : Fcp1 D. melanogaster
DB identifier  ? FBgn0035026 Secondary Identifier  ? CG12252
Source  FlyBase
  • synonyms:
  • DmFcp1,
  • FBgn0035026,
  • TFIIF-interacting CTD phosphatase,
  • FBan0012252,
  • CG12252,
  • fcp1,
  • RNApolymerase II carboxyl-terminal domain phosphatase
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

10 Alleles

DB identifier Symbol Allele Class Organism
FBal0192433 Fcp1[MB03378]   Drosophila melanogaster
FBal0199744 Fcp1[GD7548]   Drosophila melanogaster
FBal0220826 Fcp1[dsRNA.Scer\UAS.WIZ]   Drosophila melanogaster
FBal0283266 Fcp1[Scer\UAS.P\T.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0257399 Fcp1[HMS00716]   Drosophila melanogaster
FBal0239148 Fcp1[g.Scer\UAS]   Drosophila melanogaster
FBal0239149 Fcp1[Scer\UAS.g.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0220825 Fcp1[c.Scer\UAS]   Drosophila melanogaster
FBal0239150 Fcp1[R251G.g.Scer\UAS]   Drosophila melanogaster
FBal0231377 Fcp1[KK101599]   Drosophila melanogaster

12 Clones

Secondary Identifier DB identifier
AT28663 FBcl0009639
EP05744 FBcl0076835
EK185414 FBcl0099274
GH14446 FBcl0128807
RE13002 FBcl0227068
SD01014 FBcl0278093
SD13588 FBcl0278098
528283 FBcl0473346
RP001037029 FBcl0618769
RP001027019 FBcl0653736
61848 FBcl0442713
214441.68 FBcl0473334

8 Exons

DB identifier Symbol
FBgn0035026:7 Fcp1:7
FBgn0035026:6 Fcp1:6
FBgn0035026:5 Fcp1:5
FBgn0035026:4 Fcp1:4
FBgn0035026:3 Fcp1:3
FBgn0035026:2 Fcp1:2
FBgn0035026:1 Fcp1:1
FBgn0035026:8 Fcp1:8

2 Transcripts

DB identifier Gene
FBtr0072342 Fcp1
FBtr0343489 Fcp1

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0072342-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0343489-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0072342-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0343489-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

15 Pathways

1 Cross References

Identifier
Source . Name
Subject . Primary Identifier
37925 NCBI Entrez Gene identifiers FBgn0035026

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 396.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 328.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 448.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 347.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 437.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 224.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 290.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 228.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 194.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 196.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 319.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 247.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 180.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 300.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 290.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 245.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 234.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 341.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 321.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 222.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 309.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 352.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 287.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 244.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 245.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 917.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 184.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 360.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 353.0
FBgn0035026 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 190.0

7 Introns

DB identifier
Organism . Name
intron_FBgn0035026:7_FBgn0035026:6 Drosophila melanogaster
intron_FBgn0035026:6_FBgn0035026:5 Drosophila melanogaster
intron_FBgn0035026:5_FBgn0035026:4 Drosophila melanogaster
intron_FBgn0035026:4_FBgn0035026:3 Drosophila melanogaster
intron_FBgn0035026:3_FBgn0035026:2 Drosophila melanogaster
intron_FBgn0035026:2_FBgn0035026:1 Drosophila melanogaster
intron_FBgn0035026:8_FBgn0035026:6 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Fcp1 none -0.419304652   19067489
Lipid storage Fcp1 none -3.167998604   19067489
Cell size and cell-cycle regulation (1) Fcp1 none sp   16496002
Muscle morphogenesis and function (1) Fcp1 Lethal np   20220848
Muscle morphogenesis and function (1) Fcp1 none np   20220848
Muscle morphogenesis and function (2) Fcp1 Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Heat nociception (1) Fcp1 none -0.07   21074052
Heart development and function (1) Fcp1 none 0.83   20371351
Serratia marcescens infection (1) Fcp1 none 0.262626262626262   19520911
Notch pathway regulation (4) Fcp1 Completely lethal (pupal) sp   19363474
Self-renewal and differentiation in neural stem cells Fcp1 GFP aggregates number, GFP aggregates size, neuroblast more large cells, neuroblast cell shape, ganglion mother cell larger cell size, ganglion mother cell longer lineages, ganglion mother cell shape, neuroblast overproliferation, lethal sp   21549331
Pol II elongation Fcp1 Decreased Hsp70 mRNA expression 48 20 min heat shock 19279664
Adiposity regulation (1) Fcp1 none -0.376   20074523
Vaccinia virus infection Fcp1 none sp   20585561
Hippo pathway regulation Fcp1 none 1.62   23263283

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom