modENCODE |  Help |  blog

Gene : Elongin-C D. melanogaster

DB identifier  ? FBgn0023211 Secondary Identifier  ? CG9291
Name  ? Elongin C Source  FlyBase
  • synonyms:
  • dElongin C,
  • FBgn0062906,
  • ElonginC,
  • FBan0009291,
  • Elongin-C,
  • FBgn0023211,
  • CG9291,
  • d-elongin C,
  • Elongin C,
  • l(2)SH1299,
  • BcDNA:RH71704

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

7 Alleles

DB identifier Symbol Allele Class Organism
FBal0220899 Elongin-C[G6035]   Drosophila melanogaster
FBal0160497 Elongin-C[SH1299]   Drosophila melanogaster
FBal0160496 Elongin-C[e01107]   Drosophila melanogaster
FBal0263130 Elongin-C[HMS00128]   Drosophila melanogaster
FBal0194794 Elongin-C[unspecified]   Drosophila melanogaster
FBal0206970 Elongin-C[GD4709]   Drosophila melanogaster
FBal0235620 Elongin-C[KK108516]   Drosophila melanogaster

87 Clones

Secondary Identifier DB identifier
EK056024 FBcl0027664
EK150057 FBcl0027682
EK110211 FBcl0027702
EK196129 FBcl0027728
EK047826 FBcl0027732
EK242152 FBcl0027736
EK249015 FBcl0027744
EK278541 FBcl0027754
EK185226 FBcl0027764
EK103340 FBcl0027770
EK296337 FBcl0027774
EC38510 FBcl0071385
EC40139 FBcl0071397
EC40739 FBcl0071399
EC22217 FBcl0071423
EP08262 FBcl0087105
EN15857 FBcl0100389
GH21705 FBcl0136497
GH21716 FBcl0136499
GH12291 FBcl0136501
GH14188 FBcl0136503
GH19451 FBcl0136505
RE05591 FBcl0238843
RE69216 FBcl0238846
RE48660 FBcl0238852
RE50122 FBcl0238855
RE48122 FBcl0238862
RE44521 FBcl0238865
RE71003 FBcl0238867
RE51460 FBcl0238874

4 Exons

DB identifier Symbol
FBgn0023211:4 Elongin-C:4
FBgn0023211:2 Elongin-C:2
FBgn0023211:1 Elongin-C:1
FBgn0023211:3 Elongin-C:3

2 Transcripts

DB identifier Gene
FBtr0086540 Elongin-C
FBtr0086541 Elongin-C

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0086540-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0086541-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0086540-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0086541-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37237 NCBI Entrez Gene identifiers FBgn0023211
62899 BioGRID FBgn0023211

6 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1817.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 2031.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1495.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2271.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2390.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1742.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1709.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2223.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1839.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1682.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2055.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1486.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1705.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1913.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 2507.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2090.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1324.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1806.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1883.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1892.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1833.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 2038.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1715.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2258.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 988.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 3106.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 2770.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2395.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1799.0
FBgn0023211 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2161.0

3 Introns

DB identifier
Organism . Name
intron_FBgn0023211:4_FBgn0023211:2 Drosophila melanogaster
intron_FBgn0023211:2_FBgn0023211:1 Drosophila melanogaster
intron_FBgn0023211:3_FBgn0023211:1 Drosophila melanogaster

18 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Elongin-C none -0.448797897   19067489
Lipid storage Elongin-C none -1.810144687   19067489
Constitutive protein secretion and Golgi organization (1) Elongin-C Decreased horseradish peroxidase protein expression sp   16452979
Cell size and cell-cycle regulation (1) Elongin-C none sp   16496002
Cell size and cell-cycle regulation (1) Elongin-C none sp   16496002
Dendrite pattern formation Elongin-C Increased arborization np   16547170
Muscle morphogenesis and function (1) Elongin-C Lethal np   20220848
Muscle morphogenesis and function (1) Elongin-C none np   20220848
Muscle morphogenesis and function (2) Elongin-C Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Heat nociception (1) Elongin-C none 0.07   21074052
Heart development and function (1) Elongin-C none 1   20371351
Serratia marcescens infection (1) Elongin-C none -0.936507936507936   19520911
Notch pathway regulation (4) Elongin-C Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) Elongin-C none 0   19363474
PGN-induced dJNK phosphorylation Elongin-C Increased P-JNK protein expression with PGN 4.69 15 min PGN induction 19893628
Self-renewal and differentiation in neural stem cells Elongin-C GFP aggregates number, GFP aggregates size, neuroblast larger cell size, neuroblast cell shape, ganglion mother cell larger cell size, ganglion mother cell shorter lineages, ganglion mother cell shape, neuroblast underproliferation, lethal sp   21549331
Pol II elongation Elongin-C Decreased Hsp70 mRNA expression 52 20 min heat shock 19279664
Adiposity regulation (1) Elongin-C none -0.053   20074523

0 Submissions