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Gene : TBPH D. melanogaster

DB identifier  ? FBgn0025790 Secondary Identifier  ? CG10327
Name  ? TAR DNA-binding protein-43 homolog Source  FlyBase
  • synonyms:
  • Tar DNA binding protein homolog,
  • TAR DNA binding protein,
  • FBan0010327,
  • FBgn0025790,
  • TBPH,
  • TDP43,
  • TDP-43,
  • dTDP,
  • dtar,
  • CG10327

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29 Alleles

DB identifier Symbol Allele Class Organism
FBal0265707 TBPH[ex26] amorphic allele - molecular evidence Drosophila melanogaster
FBal0265708 TBPH[Scer\UAS.cLa]   Drosophila melanogaster
FBal0277269 TBPH[G2] amorphic allele - molecular evidence Drosophila melanogaster
FBal0277270 TBPH[Scer\UAS.cHa]   Drosophila melanogaster
FBal0277271 TBPH[A1]   Drosophila melanogaster
FBal0265761 TBPH[Scer\UAS.10x.T:Avic\GFP-YFP.Venus]   Drosophila melanogaster
FBal0242113 TBPH[HM05194]   Drosophila melanogaster
FBal0277057 TBPH[Scer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0261045 TBPH[Scer\UAS.cRa]   Drosophila melanogaster
FBal0277058 TBPH[A405T.Scer\UAS.T:Disc\RFP]   Drosophila melanogaster
FBal0277059 TBPH[Scer\UAS.T:Disc\RFP]   Drosophila melanogaster
FBal0159691 TBPH[EY10530]   Drosophila melanogaster
FBal0285239 TBPH[Scer\UAS.BID.T:Avic\GFP-YFP.Venus]   Drosophila melanogaster
FBal0147369 TBPH[KG08578]   Drosophila melanogaster
FBal0270425 TBPH[NIG.10327R]   Drosophila melanogaster
FBal0221488 TBPH[Delta23]   Drosophila melanogaster
FBal0221489 TBPH[Delta142]   Drosophila melanogaster
FBal0221490 TBPH[Scer\UAS.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0287626 TBPH[DD96] amorphic allele - molecular evidence Drosophila melanogaster
FBal0287627 TBPH[DD100] amorphic allele - molecular evidence Drosophila melanogaster
FBal0287628 TBPH[dsRNA.Scer\UAS.cDa]   Drosophila melanogaster
FBal0287629 TBPH[Scer\UAS.cDa]   Drosophila melanogaster
FBal0287630 TBPH[+tDa]   Drosophila melanogaster
FBal0287631 TBPH[Scer\UAS.T:Zzzz\FLAG.T:Ivir\HA1]   Drosophila melanogaster
FBal0279046 TBPH[HMS01932]   Drosophila melanogaster
FBal0208690 TBPH[GD6943]   Drosophila melanogaster
FBal0214805 TBPH[GD17745]   Drosophila melanogaster
FBal0235516 TBPH[KK108354]   Drosophila melanogaster
FBal0244510 TBPH[1]   Drosophila melanogaster

36 Clones

Secondary Identifier DB identifier
EK292014 FBcl0007344
EK050504 FBcl0007420
EC43789 FBcl0064079
EP15059 FBcl0077861
EN03763 FBcl0093403
EK174830 FBcl0101202
EK105747 FBcl0101210
EK160256 FBcl0101216
EK128730 FBcl0101218
EK183752 FBcl0101224
EK200211 FBcl0101230
EK194840 FBcl0101238
GH23490 FBcl0122259
GH14113 FBcl0129203
GH13570 FBcl0129263
LD37796 FBcl0172367
LD23410 FBcl0172370
LP06661 FBcl0186513
RE45050 FBcl0219358
RE48824 FBcl0219360
RE09981 FBcl0219369
RE50724 FBcl0219385
RE07464 FBcl0228819
RH29574 FBcl0267245
28962 FBcl0475427
CK01.131A.G4 FBcl0475430
523296 FBcl0475431
CK01.32A.E4 FBcl0475414
17174 FBcl0475438
44083 FBcl0475433

12 Exons

DB identifier Symbol
FBgn0025790:12 TBPH:12
FBgn0025790:8 TBPH:8
FBgn0025790:7 TBPH:7
FBgn0025790:6 TBPH:6
FBgn0025790:4 TBPH:4
FBgn0025790:3 TBPH:3
FBgn0025790:2 TBPH:2
FBgn0025790:10 TBPH:10
FBgn0025790:1 TBPH:1
FBgn0025790:11 TBPH:11
FBgn0025790:5 TBPH:5
FBgn0025790:9 TBPH:9

6 Transcripts

DB identifier Gene
FBtr0301644 TBPH
FBtr0089624 TBPH
FBtr0089627 TBPH
FBtr0089626 TBPH
FBtr0089625 TBPH
FBtr0301643 TBPH

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089624-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089625-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089626-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089627-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301643-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301644-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089624-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089625-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089626-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089627-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301643-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301644-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37781 NCBI Entrez Gene identifiers FBgn0025790
63374 BioGRID FBgn0025790

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1017.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 977.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 619.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1019.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 796.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 653.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 927.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1116.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1171.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 1515.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1189.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 629.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 938.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1265.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 828.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1010.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1179.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 817.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1047.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 931.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1080.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1107.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1087.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1017.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1172.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1204.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1527.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 2163.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 2069.0
FBgn0025790 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 2068.0

14 Introns

DB identifier
Organism . Name
intron_FBgn0025790:12_FBgn0025790:8 Drosophila melanogaster
intron_FBgn0025790:8_FBgn0025790:7 Drosophila melanogaster
intron_FBgn0025790:7_FBgn0025790:6 Drosophila melanogaster
intron_FBgn0025790:6_FBgn0025790:4 Drosophila melanogaster
intron_FBgn0025790:4_FBgn0025790:3 Drosophila melanogaster
intron_FBgn0025790:3_FBgn0025790:2 Drosophila melanogaster
intron_FBgn0025790:10_FBgn0025790:7 Drosophila melanogaster
intron_FBgn0025790:3_FBgn0025790:1 Drosophila melanogaster
intron_FBgn0025790:11_FBgn0025790:8 Drosophila melanogaster
intron_FBgn0025790:11_FBgn0025790:9 Drosophila melanogaster
intron_FBgn0025790:9_FBgn0025790:7 Drosophila melanogaster
intron_FBgn0025790:6_FBgn0025790:5 Drosophila melanogaster
intron_FBgn0025790:5_FBgn0025790:3 Drosophila melanogaster
intron_FBgn0025790:12_FBgn0025790:9 Drosophila melanogaster

14 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage TBPH none 1.066048324   19067489
Lipid storage TBPH none 0.796347922   19067489
Alternative splicing TBPH none sp   15492211
Cell size and cell-cycle regulation (1) TBPH none sp   16496002
Muscle morphogenesis and function (1) TBPH none np   20220848
Muscle morphogenesis and function (1) TBPH none np   20220848
Heat nociception (1) TBPH none -1.17   21074052
Heart development and function (1) TBPH none 1   20371351
Serratia marcescens infection (1) TBPH none 1.26548672566371   19520911
Notch pathway regulation (4) TBPH none 0   19363474
Notch pathway regulation (4) TBPH none 0   19363474
Adiposity regulation (1) TBPH none -0.47   20074523
Hippo pathway regulation TBPH none 2.27   23263283
Glycosylation regulation (1) TBPH none sp   21203496

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