Genomics
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11 Alleles
| DB identifier | Symbol | Allele Class | Organism |
|---|---|---|---|
| FBal0220931 | RpS9[G7201] | Drosophila melanogaster | |
| FBal0284508 | RpS9[Scer\UAS.T:Avic\GFP] | Drosophila melanogaster | |
| FBal0257171 | RpS9[HMS00271] | Drosophila melanogaster | |
| FBal0159866 | RpS9[f03376] | Drosophila melanogaster | |
| FBal0147534 | RpS9[dsRNA.cLa] | Drosophila melanogaster | |
| FBal0262333 | RpS9[CPTI000493] | Drosophila melanogaster | |
| FBal0262334 | RpS9[CPTI000785] | Drosophila melanogaster | |
| FBal0287443 | RpS9[Scer\UAS.ORF.T:Ivir\HA1] | Drosophila melanogaster | |
| FBal0214763 | RpS9[GD10484] | Drosophila melanogaster | |
| FBal0221812 | RpS9[EP3299] | Drosophila melanogaster | |
| FBal0235327 | RpS9[KK108037] | Drosophila melanogaster |
577 Clones
7 Exons
| DB identifier | Symbol |
|---|---|
| FBgn0010408:7 | RpS9:7 |
| FBgn0010408:5 | RpS9:5 |
| FBgn0010408:4 | RpS9:4 |
| FBgn0010408:2 | RpS9:2 |
| FBgn0010408:3 | RpS9:3 |
| FBgn0010408:6 | RpS9:6 |
| FBgn0010408:1 | RpS9:1 |
4 Transcripts
| DB identifier | Gene |
|---|---|
| FBtr0076424 | RpS9 |
| FBtr0076423 | RpS9 |
| FBtr0076425 | RpS9 |
| FBtr0342577 | RpS9 |
8 UTRs
| Class | DB identifier |
Organism . Name |
|---|---|---|
| FivePrimeUTR | FBtr0076423-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0076424-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0076425-5-prime-utr | Drosophila melanogaster |
| FivePrimeUTR | FBtr0342577-5-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0076423-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0076424-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0076425-3-prime-utr | Drosophila melanogaster |
| ThreePrimeUTR | FBtr0342577-3-prime-utr | Drosophila melanogaster |
Other
52 Pathways
- RNA Pol II CTD phosphorylation and interaction with CE,
- Metabolism of mRNA,
- Cleavage of Growing Transcript in the Termination Region,
- Ribosomal scanning and start codon recognition,
- RNA Polymerase II Transcription Initiation And Promoter Clearance,
- Post-Elongation Processing of the Transcript,
- Transport of Mature Transcript to Cytoplasm,
- SRP-dependent cotranslational protein targeting to membrane,
- Eukaryotic Translation Termination,
- RNA Polymerase II Transcription Elongation,
- Cap-dependent Translation Initiation,
- mRNA Capping,
- Formation of the ternary complex, and subsequently, the 43S complex,
- RNA Polymerase II Promoter Escape,
- RNA Polymerase II Transcription Termination,
- Post-Elongation Processing of Intronless pre-mRNA,
- Metabolism of proteins,
- Elongation arrest and recovery,
- Transport of the SLBP independent Mature mRNA,
- Translation initiation complex formation,
- Translation,
- Eukaryotic Translation Elongation,
- Eukaryotic Translation Initiation,
- Recycling of eIF2:GDP,
- Nonsense Mediated Decay Independent of the Exon Junction Complex,
- Nonsense-Mediated Decay,
- mRNA Processing,
- Formation of a pool of free 40S subunits,
- RNA Polymerase II Transcription,
- Metabolism of RNA,
- Transport of Mature mRNA derived from an Intron-Containing Transcript,
- Processing of Intronless Pre-mRNAs,
- GTP hydrolysis and joining of the 60S ribosomal subunit,
- 3' -UTR-mediated translational regulation,
- RNA Polymerase II Transcription Initiation,
- Transport of Mature mRNA Derived from an Intronless Transcript,
- L13a-mediated translational silencing of Ceruloplasmin expression,
- RNA Polymerase II Pre-transcription Events,
- Peptide chain elongation,
- Transport of Mature mRNAs Derived from Intronless Transcripts,
- Transport of the SLBP Dependant Mature mRNA,
- Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S,
- Processing of Capped Intron-Containing Pre-mRNA,
- Formation of the Early Elongation Complex,
- Formation of RNA Pol II elongation complex,
- RNA Polymerase II Transcription Pre-Initiation And Promoter Opening,
- Processing of Capped Intronless Pre-mRNA,
- SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs,
- SLBP independent Processing of Histone Pre-mRNAs,
- Nonsense Mediated Decay Enhanced by the Exon Junction Complex,
- Gene Expression,
- Transcription
2 Cross References
| Identifier |
Source . Name |
Subject . Primary Identifier |
|---|---|---|
| 39108 | NCBI Entrez Gene identifiers | FBgn0010408 |
| 64500 | BioGRID | FBgn0010408 |
11 Data Sets
| Name | URL |
|---|---|
| FlyBase data set for Drosophila melanogaster | |
| Swiss-Prot data set | http://ca.expasy.org/sprot |
| Drosophila 12 Genomes Consortium homology | |
| GenomeRNAi data set | |
| TreeFam data set | |
| Panther data set | |
| IntAct interactions data set | |
| BioGRID interaction data set | http://www.thebiogrid.org/downloads.php |
| GO Annotation from FlyBase | |
| FlyBase fasta data set for Drosophila melanogaster | |
| Drosophila Cell Line and Developmental Stage Gene and Exon Scores |
55 Expression Scores
7 Introns
26 RNAi Results
| Screen | Gene | Phenotype | Score | Conditions | PubMed ID |
|---|---|---|---|---|---|
| Lipid storage | RpS9 | none | 6.507968023 | 19067489 | |
| Lipid storage | RpS9 | none | -2.323664712 | 19067489 | |
| Drosophila C virus infection | RpS9 | Drosophila C virus replication down | np | 17040126 | |
| Hedgehog signaling | RpS9 | Decreased Hedgehog reporter activity | np | 12663920 | |
| Cytokinesis regulation | RpS9 | Binucleate cells with decreased viability | weak | 15547975 | |
| Intracellular Listeria monocytogenes infection | RpS9 | Increased GFP protein expression | moderate | 16020693 | |
| Drosophila C virus infection | RpS9 | Drosophila C virus infection reduced | np | 15713840 | |
| Hedgehog signaling | RpS9 | Decreased Hedgehog reporter activity | -3.71 | 16311596 | |
| Constitutive protein secretion and Golgi organization (1) | RpS9 | Decreased horseradish peroxidase protein expression | sp | 16452979 | |
| Cell size and cell-cycle regulation (1) | RpS9 | Increased G1 DNA content, decreased G2 DNA content, decreased viability | sp | 16496002 | |
| Cell size and cell-cycle regulation (1) | RpS9 | none | sp | 16496002 | |
| Cell size and cell-cycle regulation (2) | RpS9 | Decreased viability | 0.708 | 16496002 | |
| Cell size and cell-cycle regulation (3) | RpS9 | Decreased cell number | 413 | 16496002 | |
| Cell size and cell-cycle regulation (4) | RpS9 | none | below threshold | 16496002 | |
| Influenza replication | RpS9 | Decreased Influenza replication | -1.13/-2.99 | 18615016 | |
| Notch induced transcription | RpS9 | Downregulation of Notch pathway after Notch stimulation | -2.1145 | N(delta)ecn Notch stimulation | 20959007 |
| Notch induced transcription | RpS9 | none | 1.1421 | N(delta)ecn Notch stimulation | 20959007 |
| Notch induced transcription | RpS9 | none | -2.3318 | without Notch stimulation | 20959007 |
| Muscle assembly and maintenance | RpS9 | Muscles with short and/or thin myofibrils | severe | 18359903 | |
| Hh pathway regulation | RpS9 | Downregulation of Hh pathway | -0.631617523031602 | 17903264 | |
| Hh pathway regulation | RpS9 | Downregulation of Hh pathway | -0.589665308411647 | 17903264 | |
| RTK-Ras-ERK pathway regulation (1) | RpS9 | Increased ERK phosphorylation after EGF stimulation | 2.88 | 0 minutes EGF stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (1) | RpS9 | Decreased ERK phosphorylation after EGF stimulation | -4.01 | 10 minutes EGF stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (2) | RpS9 | none | 1.32 | 10 minutes sSpitz stimulation | 22028469 |
| RTK-Ras-ERK pathway regulation (2) | RpS9 | Increased ERK phosphorylation after sSpitz and EGF stimulation | 4.66 | 30 minutes sSpitz stimulation | 22028469 |
| Hippo pathway regulation | RpS9 | none | -1.56 | 23263283 |
