modENCODE |  Help |  blog

Protein : FBpp0072094 D. melanogaster

Primary Accession  ? O16130 Organism . Name  Drosophila melanogaster
MD5 Checksum  30413a7a2742534da592ae2dccf1da3b UniProt Accession  O16130
UniProt Name  RL39_DROME GenBank Identifier  AAF47154
Is UniProt Canonical  true Is Fragment  false
Length  51 Molecular Weight  6299
Name  60S ribosomal protein L39 Secondary Identifier  FBpp0072094

Publication Counts Displayer

Uni Prot Comments Displayer

Protein Sequence Displayer

Genomics

1 Genes

DB identifier Secondary Identifier Symbol Name Source Organism
FBgn0023170 CG3997 RpL39 Ribosomal protein L39 FlyBase D. melanogaster

Proteins

Protein --> Gene + chromosomal location and length of the gene.

Interactions

Cytoscape Network Displayer

 

Other

0 Components

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
NP_477314.1 RefSeq FBpp0072094
Dm.14062 UniGene FBpp0072094

3 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Reactome data set  

0 Ec Numbers

1 Locations


Located On . Primary Identifier
Start End Strand
2R 19949470 19949913 -1

49 Pathways

Identifier Name
109292 Metabolism of mRNA
92152 Metabolism of RNA
104743 mRNA Processing
92836 RNA Polymerase II Transcription Elongation
30624 RNA Pol II CTD phosphorylation and interaction with CE
112408 Formation of RNA Pol II elongation complex
97522 Formation of the Early Elongation Complex
91707 RNA Polymerase II Pre-transcription Events
87395 RNA Polymerase II Transcription
109232 RNA Polymerase II Transcription Initiation And Promoter Clearance
79444 RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
81662 RNA Polymerase II Promoter Escape
104036 RNA Polymerase II Transcription Initiation
134716 Transport of Mature mRNAs Derived from Intronless Transcripts
98338 Transport of Mature mRNA derived from an Intron-Containing Transcript
30429 Transport of Mature Transcript to Cytoplasm
85081 mRNA Capping
113171 Cleavage of Growing Transcript in the Termination Region
110551 RNA Polymerase II Transcription Termination
98175 Processing of Capped Intron-Containing Pre-mRNA
127672 Transport of the SLBP independent Mature mRNA
144030 Transport of the SLBP Dependant Mature mRNA
139281 Transport of Mature mRNA Derived from an Intronless Transcript
131272 Nonsense Mediated Decay Independent of the Exon Junction Complex
147596 Nonsense Mediated Decay Enhanced by the Exon Junction Complex
125905 Nonsense-Mediated Decay
114009 SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
144238 SLBP independent Processing of Histone Pre-mRNAs
90038 Processing of Intronless Pre-mRNAs
105649 Gene Expression

3 Protein Domains

DB identifier Name Short Name Type
IPR000077 Ribosomal protein L39e Ribosomal_L39 Family
IPR020083 Ribosomal protein L39e, conserved site Ribosomal_L39_CS Conserved_site
IPR023626 Ribosomal protein L39e domain Ribosomal_L39e_dom Domain

1 Transcripts

DB identifier Gene
FBtr0072185 RpL39