modENCODE |  Help |  blog

Gene : sea D. melanogaster

DB identifier  ? FBgn0037912 Secondary Identifier  ? CG6782
Name  ? scheggia Source  FlyBase
  • synonyms:
  • FBpp0088720,
  • FBpp0088715,
  • FBan0031305,
  • FBgn0044763,
  • FBtr0089777,
  • CG31305,
  • FBpp0088716,
  • sea,
  • FBtr0089776,
  • CG6782,
  • SLC25A1,
  • FBpp0088719,
  • FBgn0051305,
  • FBtr0089774,
  • FBpp0088718,
  • FBtr0089780,
  • l(3)EP3364,
  • DmCIC,
  • scheggia,
  • anon-WO0140519.12,
  • FBgn0037912,
  • FBtr0089775,
  • FBpp0088721,
  • FBtr0089779,
  • FBpp0088717,
  • FBtr0089778

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

16 Alleles

DB identifier Symbol Allele Class Organism
FBal0131420 sea[EP3364] loss of function allele Drosophila melanogaster
FBal0243639 sea[Delta24] loss of function allele Drosophila melanogaster
FBal0243640 sea[hs.PM]   Drosophila melanogaster
FBal0243641 sea[unspecified]   Drosophila melanogaster
FBal0257606 sea[HMS00936]   Drosophila melanogaster
FBal0260187 sea[KK116001]   Drosophila melanogaster
FBal0138543 sea[EP3252]   Drosophila melanogaster
FBal0156910 sea[EY02678a]   Drosophila melanogaster
FBal0225569 sea[CB-0520-3]   Drosophila melanogaster
FBal0225570 sea[CB-5268-3]   Drosophila melanogaster
FBal0225572 sea[d03917]   Drosophila melanogaster
FBal0225568 sea[f03747]   Drosophila melanogaster
FBal0225573 sea[d05984]   Drosophila melanogaster
FBal0138542 sea[EP3435]   Drosophila melanogaster
FBal0195617 sea[BG02200]   Drosophila melanogaster
FBal0225571 sea[d01014]   Drosophila melanogaster

136 Clones

Secondary Identifier DB identifier
UUGC0298 FBcl0000025
EK088629 FBcl0019240
UUGC0424 FBcl0004947
EK193964 FBcl0022140
EK174143 FBcl0022268
EK266152 FBcl0022854
EK038503 FBcl0022886
EK139959 FBcl0010180
CK00404 FBcl0059009
EC12946 FBcl0061311
EP13114 FBcl0074819
GM10469 FBcl0137649
GM12756 FBcl0144017
GM13204 FBcl0144096
LD46175 FBcl0179203
RH64821 FBcl0272950
SD12654 FBcl0276490
SD27967 FBcl0276493
SD18793 FBcl0276496
SD22380 FBcl0276499
AT26891 FBcl0295605
RH32028 FBcl0311671
RE43955 FBcl0311663
RE45481 FBcl0311664
RH37879 FBcl0311665
RH39642 FBcl0311666
RH01278 FBcl0311667
RH02471 FBcl0311668
RH09141 FBcl0311669
RH20982 FBcl0311672

7 Exons

DB identifier Symbol
FBgn0037912:5 sea:5
FBgn0037912:2 sea:2
FBgn0037912:1 sea:1
FBgn0037912:3 sea:3
FBgn0037912:7 sea:7
FBgn0037912:6 sea:6
FBgn0037912:4 sea:4

4 Transcripts

DB identifier Gene
FBtr0100461 sea
FBtr0100465 sea
FBtr0100464 sea
FBtr0100462 sea

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0100461-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100462-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100464-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100465-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100461-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100462-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100464-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100465-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

1 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3772221, 3772232 NCBI Entrez Gene identifiers FBgn0037912

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 5727.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 6581.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 4869.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 8925.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 8877.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 3274.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2128.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 3149.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2730.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3804.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 2746.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 3593.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 6050.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2922.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 5771.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 4545.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 4460.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1551.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 6416.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 3664.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 9455.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 5252.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 3821.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2734.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1313.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 5848.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1492.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 317.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 283.0
FBgn0037912 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 378.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0037912:5_FBgn0037912:2 Drosophila melanogaster
intron_FBgn0037912:2_FBgn0037912:1 Drosophila melanogaster
intron_FBgn0037912:3_FBgn0037912:2 Drosophila melanogaster
intron_FBgn0037912:7_FBgn0037912:6 Drosophila melanogaster
intron_FBgn0037912:6_FBgn0037912:2 Drosophila melanogaster
intron_FBgn0037912:4_FBgn0037912:2 Drosophila melanogaster

8 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage sea Increased lipid droplet area 8.051589914   19067489
Lipid storage sea Increased lipid droplet area 7.633250803   19067489
Lipid storage sea none 7.944966134   19067489
Lipid storage sea none -0.039910812   19067489
Heat nociception (1) sea none 0.17   21074052
Heat nociception (1) sea none -1.17   21074052
Heat nociception (1) sea none 0.17   21074052
Heat nociception (1) sea none -1.17   21074052

0 Submissions