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Gene : shi D. melanogaster

DB identifier  ? FBgn0003392 Secondary Identifier  ? CG18102
Name  ? shibire Source  FlyBase
  • synonyms:
  • DNM3,
  • anon-WO0153538.12,
  • FBgn0045942,
  • FBgn0030705,
  • l(1)shi,
  • CG18102,
  • FBan0018102,
  • Shibere,
  • Dynamin,
  • Shi,
  • l(1)VII,
  • anon-WO0153538.13,
  • anon-WO0153538.14,
  • FBgn0045943,
  • Shibire,
  • Ddyn4,
  • FBgn0003392,
  • FBgn0045944,
  • shibiri,
  • Ddyn,
  • DYN,
  • Ddyn3

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84 Alleles

DB identifier Symbol Allele Class Organism
FBal0267316 shi[7C7]   Drosophila melanogaster
FBal0270222 shi[ts1.IVS.p10.20xScer\UAS]   Drosophila melanogaster
FBal0270223 shi[ts1.IVS.Syn21.p10.20xScer\UAS]   Drosophila melanogaster
FBal0270224 shi[ts1.IVS.Syn21.p10.20xScer\UAS.T:Avic\GFP]   Drosophila melanogaster
FBal0270225 shi[ts1.IVS.Syn21.p10.13xEcol\lexAop]   Drosophila melanogaster
FBal0243708 shi[ts1.Ncra\QUAS]   Drosophila melanogaster
FBal0243709 shi[ts1.Scer\FRT.Ncra\QUAS]   Drosophila melanogaster
FBal0243710 shi[ts1.-FRT.Ncra\QUAS]   Drosophila melanogaster
FBal0246565 shi[ts.Scer\UAS.cUa]   Drosophila melanogaster
FBal0216181 shi[EP-866]   Drosophila melanogaster
FBal0240371 shi[FL54] loss of function allele Drosophila melanogaster
FBal0243328 shi[ts1.Ecol\lexAop]   Drosophila melanogaster
FBal0129078 shi[KG03690]   Drosophila melanogaster
FBal0266444 shi[HMS00154]   Drosophila melanogaster
FBal0284845 shi[MI08316]   Drosophila melanogaster
FBal0065690 shi[SHY]   Drosophila melanogaster
FBal0015610 shi[1]   Drosophila melanogaster
FBal0015618 shi[9]   Drosophila melanogaster
FBal0082266 shi[t15]   Drosophila melanogaster
FBal0056177 shi[unspecified]   Drosophila melanogaster
FBal0015620 shi[11]   Drosophila melanogaster
FBal0082262 shi[tp4]   Drosophila melanogaster
FBal0039904 shi[EM42]   Drosophila melanogaster
FBal0039914 shi[EM7]   Drosophila melanogaster
FBal0015625 shi[16]   Drosophila melanogaster
FBal0146811 shi[K39A.GMR]   Drosophila melanogaster
FBal0178013 shi[K44A.ro]   Drosophila melanogaster
FBal0015611 shi[2]   Drosophila melanogaster
FBal0039902 shi[EM35]   Drosophila melanogaster
FBal0082264 shi[tp1]   Drosophila melanogaster

227 Clones

Secondary Identifier DB identifier
AT13027 FBcl0011075
EC13713 FBcl0062991
EP10113 FBcl0076581
EP11716 FBcl0076591
EP04504 FBcl0076921
EP19829 FBcl0076923
EP07316 FBcl0076991
EP11613 FBcl0076993
EP04555 FBcl0076995
EP12926 FBcl0077085
GH16863 FBcl0116945
GH23760 FBcl0117963
GH04695 FBcl0119649
GH19066 FBcl0119695
GH16874 FBcl0119703
GH20146 FBcl0119727
GH24867 FBcl0120183
GH05029 FBcl0120231
GH06242 FBcl0120253
GH24692 FBcl0120275
GH04253 FBcl0120523
GH23121 FBcl0120599
GH14886 FBcl0120655
GH13271 FBcl0120667
GH12033 FBcl0120703
GH06384 FBcl0120717
GH20380 FBcl0120843
GH18244 FBcl0120939
EK276618 FBcl0125722
EK121806 FBcl0125928

28 Exons

DB identifier Symbol
FBgn0003392:21 shi:21
FBgn0003392:2 shi:2
FBgn0003392:8 shi:8
FBgn0003392:10 shi:10
FBgn0003392:11 shi:11
FBgn0003392:12 shi:12
FBgn0003392:13 shi:13
FBgn0003392:14 shi:14
FBgn0003392:15 shi:15
FBgn0003392:17 shi:17
FBgn0003392:18 shi:18
FBgn0003392:19 shi:19
FBgn0003392:22 shi:22
FBgn0003392:23 shi:23
FBgn0003392:24 shi:24
FBgn0003392:28 shi:28
FBgn0003392:6 shi:6
FBgn0003392:25 shi:25
FBgn0003392:7 shi:7
FBgn0003392:5 shi:5
FBgn0003392:9 shi:9
FBgn0003392:1 shi:1
FBgn0003392:27 shi:27
FBgn0003392:3 shi:3
FBgn0003392:20 shi:20
FBgn0003392:16 shi:16
FBgn0003392:4 shi:4
FBgn0003392:26 shi:26

15 Transcripts

DB identifier Gene
FBtr0301596 shi
FBtr0074124 shi
FBtr0111036 shi
FBtr0111037 shi
FBtr0074118 shi
FBtr0074119 shi
FBtr0074121 shi
FBtr0074122 shi
FBtr0074123 shi
FBtr0301594 shi
FBtr0301595 shi
FBtr0301597 shi
FBtr0333717 shi
FBtr0333718 shi
FBtr0340413 shi

30 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0111036-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0111037-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074118-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074119-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074121-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074122-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074123-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0074124-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0340413-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301594-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301595-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301596-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301597-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333717-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0333718-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111036-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111037-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074118-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074119-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074121-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074122-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074123-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0074124-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0340413-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301594-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301595-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301596-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301597-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333717-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0333718-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
45928 NCBI Entrez Gene identifiers FBgn0003392
69991 BioGRID FBgn0003392

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1121.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 974.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1096.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1375.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1240.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 763.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2261.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1551.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 835.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3008.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1793.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1198.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1084.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1281.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1627.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 1231.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1849.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1491.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1284.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1237.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1131.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 887.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1265.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2577.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1208.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 1988.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1932.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1042.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 679.0
FBgn0003392 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 856.0

30 Introns

DB identifier
Organism . Name
intron_FBgn0003392:9_FBgn0003392:10 Drosophila melanogaster
intron_FBgn0003392:10_FBgn0003392:11 Drosophila melanogaster
intron_FBgn0003392:11_FBgn0003392:12 Drosophila melanogaster
intron_FBgn0003392:12_FBgn0003392:13 Drosophila melanogaster
intron_FBgn0003392:13_FBgn0003392:14 Drosophila melanogaster
intron_FBgn0003392:14_FBgn0003392:15 Drosophila melanogaster
intron_FBgn0003392:15_FBgn0003392:17 Drosophila melanogaster
intron_FBgn0003392:17_FBgn0003392:18 Drosophila melanogaster
intron_FBgn0003392:18_FBgn0003392:19 Drosophila melanogaster
intron_FBgn0003392:19_FBgn0003392:20 Drosophila melanogaster
intron_FBgn0003392:20_FBgn0003392:21 Drosophila melanogaster
intron_FBgn0003392:21_FBgn0003392:22 Drosophila melanogaster
intron_FBgn0003392:22_FBgn0003392:23 Drosophila melanogaster
intron_FBgn0003392:23_FBgn0003392:24 Drosophila melanogaster
intron_FBgn0003392:24_FBgn0003392:27 Drosophila melanogaster
intron_FBgn0003392:1_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:8_FBgn0003392:10 Drosophila melanogaster
intron_FBgn0003392:18_FBgn0003392:21 Drosophila melanogaster
intron_FBgn0003392:6_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:24_FBgn0003392:25 Drosophila melanogaster
intron_FBgn0003392:7_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:5_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:2_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:3_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:15_FBgn0003392:16 Drosophila melanogaster
intron_FBgn0003392:16_FBgn0003392:17 Drosophila melanogaster
intron_FBgn0003392:24_FBgn0003392:28 Drosophila melanogaster
intron_FBgn0003392:4_FBgn0003392:8 Drosophila melanogaster
intron_FBgn0003392:19_FBgn0003392:21 Drosophila melanogaster
intron_FBgn0003392:24_FBgn0003392:26 Drosophila melanogaster

25 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage shi Decreased lipid droplet area -2.247452592   19067489
Lipid storage shi Decreased lipid droplet area -0.699801128   19067489
Lipid storage shi Decreased lipid droplet area -0.182863104   19067489
Lipid storage shi Decreased lipid droplet area -1.749361709   19067489
Cell morphology shi Morphology np   14527345
Cytokinesis regulation shi Binucleate cells medium   15547975
Cell size and cell-cycle regulation (1) shi none sp   16496002
CD4 regulation by human immunodeficiency virus Type 1 Nef (HIV-1 Nef) shi none 2.59   17267500
Mitochondrial biogenesis and function shi Decreased mitochondrial citrate synthase activity 0.585   18042644
Muscle morphogenesis and function (1) shi Lethal np   20220848
Muscle morphogenesis and function (1) shi Lethal np   20220848
Muscle morphogenesis and function (2) shi Wing posture / locomotion / ability to fly defect or lethal / semi-lethal np   20220848
Heat nociception (1) shi none 0.46   21074052
Serratia marcescens infection (1) shi none -0.428571428571428   19520911
Notch pathway regulation (4) shi Completely lethal (pupal) sp   19363474
Notch pathway regulation (4) shi Completely lethal (before pupal) sp   19363474
Notch pathway regulation (3) shi Upregulation of Notch pathway np   20493818
Notch pathway regulation (4) shi Wing disc NRE:EGFP: up, broader, gap; wing disc myrRFP: accumulation sp en-GAL4 20493818
Adiposity regulation (1) shi none 0.36   20074523
RTK-Ras-ERK pathway regulation (1) shi Increased ERK phosphorylation after EGF stimulation 1.65 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) shi none -0.95 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shi Decreased ERK phosphorylation after sSpitz and EGF stimulation -1.58 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) shi none -1.25 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation shi none 0.44   23263283
Glycosylation regulation (1) shi Decreased Chp protein expression np   21203496

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