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Gene : Vps35 D. melanogaster

DB identifier  ? FBgn0034708 Secondary Identifier  ? CG5625
Name  ? Vacuolar protein sorting 35 Source  FlyBase
  • synonyms:
  • FBan0005625,
  • Vps35,
  • CG5625,
  • FBgn0034708,
  • DVps35

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11 Alleles

DB identifier Symbol Allele Class Organism
FBal0204753 Vps35[GD11710]   Drosophila melanogaster
FBal0218896 Vps35[DG08107]   Drosophila melanogaster
FBal0212472 Vps35[EY16641]   Drosophila melanogaster
FBal0161256 Vps35[EY14200]   Drosophila melanogaster
FBal0221801 Vps35[E42]   Drosophila melanogaster
FBal0244072 Vps35[1]   Drosophila melanogaster
FBal0244073 Vps35[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0244074 Vps35[Scer\UAS.T:Hsap\MYC]   Drosophila melanogaster
FBal0278975 Vps35[HMS01858]   Drosophila melanogaster
FBal0221635 Vps35[MH20] loss of function allele Drosophila melanogaster
FBal0274766 Vps35[NIG.5625R]   Drosophila melanogaster

146 Clones

Secondary Identifier DB identifier
AT09011 FBcl0020815
EK119902 FBcl0041250
EK274334 FBcl0041322
EK234709 FBcl0041352
EK205341 FBcl0041364
EK158929 FBcl0041380
EK263824 FBcl0041396
EK066536 FBcl0041408
EK267962 FBcl0041420
EK162430 FBcl0041434
EK267763 FBcl0041462
EK253460 FBcl0041488
EK138923 FBcl0041504
EK103730 FBcl0041514
EP15639 FBcl0080171
EP12363 FBcl0080179
GH09501 FBcl0122515
GH28513 FBcl0122523
LD17594 FBcl0158117
LD09234 FBcl0158122
LD09906 FBcl0158165
LD29957 FBcl0172502
RE33829 FBcl0219666
RE14284 FBcl0219705
RE56568 FBcl0219735
RE52117 FBcl0219736
RE53064 FBcl0219740
RE53158 FBcl0219743
RE63606 FBcl0219745
RE45724 FBcl0219792

10 Exons

DB identifier Symbol
FBgn0034708:2 Vps35:2
FBgn0034708:3 Vps35:3
FBgn0034708:4 Vps35:4
FBgn0034708:5 Vps35:5
FBgn0034708:6 Vps35:6
FBgn0034708:7 Vps35:7
FBgn0034708:8 Vps35:8
FBgn0034708:10 Vps35:10
FBgn0034708:1 Vps35:1
FBgn0034708:9 Vps35:9

2 Transcripts

DB identifier Gene
FBtr0071771 Vps35
FBtr0071772 Vps35

4 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0071771-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0071772-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071771-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0071772-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
37536 NCBI Entrez Gene identifiers FBgn0034708
63153 BioGRID FBgn0034708

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 1193.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 1319.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 1140.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 1661.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 1548.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 1029.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1341.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1223.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 838.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2984.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1354.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 853.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 1444.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 1348.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1467.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 797.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 1708.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 1423.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1202.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 1295.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1234.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 1894.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 1381.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 1641.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1115.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2245.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1790.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 1193.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1233.0
FBgn0034708 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1201.0

9 Introns

DB identifier
Organism . Name
intron_FBgn0034708:2_FBgn0034708:3 Drosophila melanogaster
intron_FBgn0034708:3_FBgn0034708:4 Drosophila melanogaster
intron_FBgn0034708:4_FBgn0034708:5 Drosophila melanogaster
intron_FBgn0034708:5_FBgn0034708:6 Drosophila melanogaster
intron_FBgn0034708:6_FBgn0034708:7 Drosophila melanogaster
intron_FBgn0034708:7_FBgn0034708:8 Drosophila melanogaster
intron_FBgn0034708:8_FBgn0034708:10 Drosophila melanogaster
intron_FBgn0034708:1_FBgn0034708:3 Drosophila melanogaster
intron_FBgn0034708:8_FBgn0034708:9 Drosophila melanogaster

21 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Vps35 none -0.529015023   19067489
Lipid storage Vps35 none 0.339107533   19067489
Cell size and cell-cycle regulation (1) Vps35 none sp   16496002
Endocytosis Vps35 Reduction of endocytosis np   18057029
Muscle morphogenesis and function (1) Vps35 none np   20220848
Heat nociception (1) Vps35 Increased noxious heat avoidance 5.72   21074052
Heat nociception (1) Vps35 none -0.66   21074052
Heart development and function (1) Vps35 none 1   20371351
Serratia marcescens infection (1) Vps35 none -0.3125   19520911
Notch pathway regulation (4) Vps35 Notum malformation death 1   19363474
Notch pathway regulation (4) Vps35 none 0   19363474
Notch pathway regulation (1) Vps35 Upregulation of Notch pathway np   20493818
Adiposity regulation (1) Vps35 Decreased triglyceride expression -0.627   20074523
Adiposity regulation (2) Vps35 Decreased triglyceride expression -0.29   20074523
Adiposity regulation (3) Vps35 none 0.108   20074523
Adiposity regulation (4) Vps35 Decreased triglyceride expression -0.463   20074523
Adiposity regulation (5) Vps35 Decreased triglyceride expression -0.41   20074523
Secretory pathway regulation Vps35 Decreased BiP signal peptide and firefly luciferase fusion protein expression (-2) - (-1.5)   19942856
Wnt proteins secretion Vps35 none -0.7   22094269
Hippo pathway regulation Vps35 none 1.07   23263283
Glycosylation regulation (1) Vps35 none sp   21203496

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