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Gene : sv D. melanogaster

DB identifier  ? FBgn0005561 Secondary Identifier  ? CG11049
Name  ? shaven Source  FlyBase
  • synonyms:
  • DPax2,
  • pol,
  • Shaven,
  • CG11049,
  • FBan0011049,
  • pax2/sparkling,
  • spa-sv,
  • Cat,
  • Sparkling,
  • sparkling poliert,
  • Cataract,
  • spa,
  • FBgn0005561,
  • D-pax-2,
  • FBgn0004541,
  • en(lz)4G/I,
  • Pax258,
  • DPax-2,
  • D-Pax2,
  • FBgn0003649,
  • sparklin poliert,
  • FBgn0003468,
  • poliert,
  • l(4)40,
  • dPax258,
  • FBgn0020913,
  • Sv,
  • Pax2/5/8,
  • PAX2,
  • shaven/sparkling

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57 Alleles

DB identifier Symbol Allele Class Organism
FBal0263520 sv[dsRNA.Scer\UAS]   Drosophila melanogaster
FBal0280795 sv[T:Avic\GFP-SF,T:Zzzz\FLAG,T:Zzzz\PSP.CS,T:Zzzz\TEV.CS,T:Zzzz\BLRP]   Drosophila melanogaster
FBal0154464 sv[Delta122]   Drosophila melanogaster
FBal0284793 sv[sev.PS]   Drosophila melanogaster
FBal0284794 sv[GMR.PS]   Drosophila melanogaster
FBal0015985 sv[spa-1]   Drosophila melanogaster
FBal0016605 sv[35a]   Drosophila melanogaster
FBal0016606 sv[de] loss of function allele Drosophila melanogaster
FBal0016607 sv[n] loss of function allele Drosophila melanogaster
FBal0248823 sv[4-M1030]   Drosophila melanogaster
FBal0015991 sv[spa-pol]   Drosophila melanogaster
FBal0096666 sv[5]   Drosophila melanogaster
FBal0063755 sv[+mFa]   Drosophila melanogaster
FBal0092507 sv[hs.PF]   Drosophila melanogaster
FBal0092508 sv[6.7.cFa]   Drosophila melanogaster
FBal0092509 sv[2.0.cFa]   Drosophila melanogaster
FBal0096661 sv[sev.PB]   Drosophila melanogaster
FBal0126328 sv[4G]   Drosophila melanogaster
FBal0096665 sv[6] loss of function allele Drosophila melanogaster
FBal0119117 sv[mRDx3]   Drosophila melanogaster
FBal0119118 sv[m9]   Drosophila melanogaster
FBal0119119 sv[m8]   Drosophila melanogaster
FBal0119120 sv[m7]   Drosophila melanogaster
FBal0119121 sv[m5]   Drosophila melanogaster
FBal0119122 sv[m3]   Drosophila melanogaster
FBal0119123 sv[m14]   Drosophila melanogaster
FBal0119124 sv[m13]   Drosophila melanogaster
FBal0119125 sv[m12]   Drosophila melanogaster
FBal0119126 sv[m11]   Drosophila melanogaster
FBal0119127 sv[m10]   Drosophila melanogaster

19 Clones

Secondary Identifier DB identifier
IP15123 FBcl0317693
EK045526 FBcl0001734
EK234156 FBcl0025020
EK044161 FBcl0025602
EP18804 FBcl0089457
EK209905 FBcl0138274
EK248564 FBcl0138586
EK247660 FBcl0138890
EK266524 FBcl0138944
EK258561 FBcl0139330
IP01047 FBcl0294366
162569 FBcl0399474
153996 FBcl0399482
125425 FBcl0399502
CK01.56B.G3 FBcl0399517
159854 FBcl0399523
CK01.54B.H2 FBcl0399553
145816 FBcl0399560
107905 FBcl0399569

17 Exons

DB identifier Symbol
FBgn0005561:10 sv:10
FBgn0005561:11 sv:11
FBgn0005561:12 sv:12
FBgn0005561:14 sv:14
FBgn0005561:2 sv:2
FBgn0005561:3 sv:3
FBgn0005561:4 sv:4
FBgn0005561:5 sv:5
FBgn0005561:7 sv:7
FBgn0005561:8 sv:8
FBgn0005561:9 sv:9
FBgn0005561:15 sv:15
FBgn0005561:17 sv:17
FBgn0005561:16 sv:16
FBgn0005561:1 sv:1
FBgn0005561:13 sv:13
FBgn0005561:6 sv:6

7 Transcripts

DB identifier Gene
FBtr0089328 sv
FBtr0100342 sv
FBtr0100344 sv
FBtr0100345 sv
FBtr0301563 sv
FBtr0089327 sv
FBtr0100346 sv

14 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0089327-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0089328-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100342-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100344-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100345-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0100346-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0301563-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089327-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0089328-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100342-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100344-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100345-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0100346-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0301563-3-prime-utr Drosophila melanogaster

Interactions

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43825 NCBI Entrez Gene identifiers FBgn0005561
68651 BioGRID FBgn0005561

10 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 117.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 106.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 82.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 84.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 89.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 175.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 136.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 52.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 245.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 67.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 99.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 103.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 91.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 190.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 65.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 141.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 72.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 75.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 61.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 112.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 110.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 46.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 145.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 42.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 80.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 86.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 138.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 234.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 613.0
FBgn0005561 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 659.0

20 Introns

DB identifier
Organism . Name
intron_FBgn0005561:2_FBgn0005561:3 Drosophila melanogaster
intron_FBgn0005561:3_FBgn0005561:4 Drosophila melanogaster
intron_FBgn0005561:4_FBgn0005561:5 Drosophila melanogaster
intron_FBgn0005561:5_FBgn0005561:7 Drosophila melanogaster
intron_FBgn0005561:7_FBgn0005561:8 Drosophila melanogaster
intron_FBgn0005561:8_FBgn0005561:9 Drosophila melanogaster
intron_FBgn0005561:9_FBgn0005561:10 Drosophila melanogaster
intron_FBgn0005561:10_FBgn0005561:11 Drosophila melanogaster
intron_FBgn0005561:11_FBgn0005561:12 Drosophila melanogaster
intron_FBgn0005561:12_FBgn0005561:14 Drosophila melanogaster
intron_FBgn0005561:14_FBgn0005561:15 Drosophila melanogaster
intron_FBgn0005561:15_FBgn0005561:17 Drosophila melanogaster
intron_FBgn0005561:14_FBgn0005561:16 Drosophila melanogaster
intron_FBgn0005561:11_FBgn0005561:15 Drosophila melanogaster
intron_FBgn0005561:12_FBgn0005561:15 Drosophila melanogaster
intron_FBgn0005561:12_FBgn0005561:16 Drosophila melanogaster
intron_FBgn0005561:1_FBgn0005561:3 Drosophila melanogaster
intron_FBgn0005561:11_FBgn0005561:13 Drosophila melanogaster
intron_FBgn0005561:13_FBgn0005561:14 Drosophila melanogaster
intron_FBgn0005561:6_FBgn0005561:7 Drosophila melanogaster

8 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage sv none -0.008047473   19067489
Lipid storage sv none -0.013456852   19067489
Dendrite pattern formation sv Decreased arborization np   16547170
Muscle morphogenesis and function (1) sv none np   20220848
Serratia marcescens infection (1) sv none 0.821917808219178   19520911
Notch pathway regulation (4) sv none 0   19363474
Adiposity regulation (1) sv none -0.369   20074523
Hippo pathway regulation sv none -0.13   23263283

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