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Gene : Hrb98DE D. melanogaster

DB identifier  ? FBgn0001215 Secondary Identifier  ? CG9983
Name  ? Heterogeneous nuclear ribonucleoprotein at 98DE Source  FlyBase
  • synonyms:
  • HRB98DE/hrp38,
  • FBgn0014945,
  • Pen9,
  • HRB98DE,
  • p9,
  • E7Delta6,
  • Hrb98 de,
  • hnRNA-binding protein 1,
  • FBgn0003056,
  • Hrb1,
  • FBan0009983,
  • hnRNP A2/B1,
  • anon-E7Delta6,
  • HDP(P9),
  • hrp38,
  • CG9983,
  • FBgn0001215

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24 Alleles

DB identifier Symbol Allele Class Organism
FBal0279776 Hrb98DE[Scer\UAS.cSa]   Drosophila melanogaster
FBal0265589 Hrb98DE[S038907]   Drosophila melanogaster
FBal0211693 Hrb98DE[CC01563]   Drosophila melanogaster
FBal0211694 Hrb98DE[CA06921]   Drosophila melanogaster
FBal0183249 Hrb98DE[DG25708]   Drosophila melanogaster
FBal0245541 Hrb98DE[JF01249]   Drosophila melanogaster
FBal0156391 Hrb98DE[Wee-P25]   Drosophila melanogaster
FBal0276796 Hrb98DE[Scer\UAS.T:Disc\RFP]   Drosophila melanogaster
FBal0276797 Hrb98DE[Scer\UAS.P\T.T:Disc\RFP]   Drosophila melanogaster
FBal0150775 Hrb98DE[ZCL0588]   Drosophila melanogaster
FBal0160316 Hrb98DE[A544]   Drosophila melanogaster
FBal0147870 Hrb98DE[EY01550]   Drosophila melanogaster
FBal0248107 Hrb98DE[HMS00342]   Drosophila melanogaster
FBal0288452 Hrb98DE[Scer\UAS.cKa]   Drosophila melanogaster
FBal0288453 Hrb98DE[D302V.Scer\UAS]   Drosophila melanogaster
FBal0044854 Hrb98DE[1A.hs]   Drosophila melanogaster
FBal0044855 Hrb98DE[1B.hs]   Drosophila melanogaster
FBal0262436 Hrb98DE[CPTI000205]   Drosophila melanogaster
FBal0262437 Hrb98DE[CPTI000165]   Drosophila melanogaster
FBal0261568 Hrb98DE[CPTI003669]   Drosophila melanogaster
FBal0207321 Hrb98DE[GD14939]   Drosophila melanogaster
FBal0227017 Hrb98DE[NP3125]   Drosophila melanogaster
FBal0227018 Hrb98DE[d05172] hypomorphic allele - molecular evidence Drosophila melanogaster
FBal0276628 Hrb98DE[NIG.9983R]   Drosophila melanogaster

376 Clones

Secondary Identifier DB identifier
LD07818 FBcl0324638
LD13413 FBcl0324639
EK186857 FBcl0003238
EK306364 FBcl0003916
EK255658 FBcl0003990
EK211736 FBcl0004010
EK205548 FBcl0004076
EK250206 FBcl0004100
EK106008 FBcl0004144
EK216922 FBcl0004184
EK222313 FBcl0004226
EK182519 FBcl0004246
EK230728 FBcl0004268
EK129616 FBcl0004286
EK090106 FBcl0004308
EK238660 FBcl0004386
EK172901 FBcl0004406
EK143514 FBcl0004428
EK218561 FBcl0004446
EK224149 FBcl0004462
EK116827 FBcl0004524
EK097339 FBcl0004680
EK282219 FBcl0004742
EK139819 FBcl0004782
EK091618 FBcl0004822
bs55g11 FBcl0046875
bs44f02 FBcl0046881
bs40e09 FBcl0046885
bs16f02 FBcl0046887
bs12g09 FBcl0046891

10 Exons

DB identifier Symbol
FBgn0001215:2 Hrb98DE:2
FBgn0001215:4 Hrb98DE:4
FBgn0001215:5 Hrb98DE:5
FBgn0001215:6 Hrb98DE:6
FBgn0001215:7 Hrb98DE:7
FBgn0001215:8 Hrb98DE:8
FBgn0001215:3 Hrb98DE:3
FBgn0001215:10 Hrb98DE:10
FBgn0001215:1 Hrb98DE:1
FBgn0001215:9 Hrb98DE:9

6 Transcripts

DB identifier Gene
FBtr0085303 Hrb98DE
FBtr0085300 Hrb98DE
FBtr0085302 Hrb98DE
FBtr0085301 Hrb98DE
FBtr0085299 Hrb98DE
FBtr0085298 Hrb98DE

12 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0085302-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085300-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085298-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085299-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085301-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0085303-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085302-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085300-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085298-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085299-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085301-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0085303-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
43385 NCBI Entrez Gene identifiers FBgn0001215
68261 BioGRID FBgn0001215

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 3876.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 4941.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 2671.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2090.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 3396.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 11429.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2065.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2322.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 5043.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 6275.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 4928.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 4226.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2895.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 6856.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 5301.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 3080.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 4201.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 4382.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3890.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 4312.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 3258.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 4781.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2245.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2715.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 3867.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 7825.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 8933.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 10293.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 5348.0
FBgn0001215 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 5112.0

11 Introns

DB identifier
Organism . Name
intron_FBgn0001215:2_FBgn0001215:3 Drosophila melanogaster
intron_FBgn0001215:3_FBgn0001215:5 Drosophila melanogaster
intron_FBgn0001215:5_FBgn0001215:6 Drosophila melanogaster
intron_FBgn0001215:6_FBgn0001215:7 Drosophila melanogaster
intron_FBgn0001215:7_FBgn0001215:9 Drosophila melanogaster
intron_FBgn0001215:2_FBgn0001215:4 Drosophila melanogaster
intron_FBgn0001215:4_FBgn0001215:5 Drosophila melanogaster
intron_FBgn0001215:7_FBgn0001215:8 Drosophila melanogaster
intron_FBgn0001215:1_FBgn0001215:3 Drosophila melanogaster
intron_FBgn0001215:1_FBgn0001215:4 Drosophila melanogaster
intron_FBgn0001215:7_FBgn0001215:10 Drosophila melanogaster

20 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Hrb98DE none 1.307508169   19067489
Lipid storage Hrb98DE none 0   19067489
Alternative splicing Hrb98DE none sp   15492211
mRNA decay Hrb98DE Increased ARE-RNA degredation np   15766526
Cell size and cell-cycle regulation (1) Hrb98DE none sp   16496002
Microtubule assembly and organization Hrb98DE none np   18463163
Muscle morphogenesis and function (1) Hrb98DE Flightless np   20220848
Muscle morphogenesis and function (1) Hrb98DE Flightless np   20220848
Muscle morphogenesis and function (4) Hrb98DE Frayed myofibrils, fuzzy (broadened) Z-line, actin aggregates np   20220848
Heat nociception (1) Hrb98DE Increased noxious heat avoidance 3.07   21074052
Heart development and function (1) Hrb98DE none 1   20371351
Serratia marcescens infection (1) Hrb98DE none 0.267857142857142   19520911
Notch pathway regulation (4) Hrb98DE Gain of bristles, bristle morphology defects, planar polarity defects, notum malformation death sp   19363474
Notch pathway regulation (4) Hrb98DE Gain of bristles, colour defects, bristle morphology defects, planar polarity defects, notum malformation death sp   19363474
PGN-induced dJNK phosphorylation Hrb98DE Increased P-JNK protein expression with PGN 3.31 15 min PGN induction 19893628
Notch pathway regulation (1) Hrb98DE Downregulation of Notch pathway np   20493818
Adiposity regulation (1) Hrb98DE none 0.502   20074523
Hippo pathway regulation Hrb98DE Downregulation of Hippo pathway 3.8   23263283
Srp/Lz-induced transcriptional activation Hrb98DE Decreased Srp/Lz-induced transcription -5.1   20368357
Glycosylation regulation (1) Hrb98DE none sp   21203496

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