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Gene : Hrb87F D. melanogaster

DB identifier  ? FBgn0004237 Secondary Identifier  ? CG12749
Name  ? Heterogeneous nuclear ribonucleoprotein at 87F Source  FlyBase
  • synonyms:
  • HRP36,
  • hnRNP A2/B1,
  • P11/Hrb87F,
  • hrp40,
  • Heterogeneous nuclear ribonucleoprotein at 85CD,
  • HRB87F/hrp36,
  • HRB87F,
  • hnRNA-binding protein 2,
  • P11,
  • Hrb87Fa,
  • hnRNP36,
  • Hrb2,
  • Hrb85CD,
  • p38,
  • FBgn0004237,
  • FBan0012749,
  • FBgn0010230,
  • CG12749,
  • Q16,
  • Q14

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17 Alleles

DB identifier Symbol Allele Class Organism
FBal0279775 Hrb87F[Scer\UAS.cSa]   Drosophila melanogaster
FBal0211692 Hrb87F[CC00189]   Drosophila melanogaster
FBal0245542 Hrb87F[JF01250]   Drosophila melanogaster
FBal0245942 Hrb87F[JF01757]   Drosophila melanogaster
FBal0058707 Hrb87F[Y1217] wild-type allele Drosophila melanogaster
FBal0147871 Hrb87F[KG02089]   Drosophila melanogaster
FBal0058709 Hrb87F[28]   Drosophila melanogaster
FBal0058706 Hrb87F[tHa]   Drosophila melanogaster
FBal0060650 Hrb87F[tHb]   Drosophila melanogaster
FBal0058708 Hrb87F[7]   Drosophila melanogaster
FBal0066037 Hrb87F[hs.T:Zzzz\FLAG]   Drosophila melanogaster
FBal0207320 Hrb87F[GD7818]   Drosophila melanogaster
FBal0227014 Hrb87F[BG02743]   Drosophila melanogaster
FBal0227015 Hrb87F[c02654]   Drosophila melanogaster
FBal0227016 Hrb87F[5-HA-1584]   Drosophila melanogaster
FBal0271331 Hrb87F[NIG.12749R]   Drosophila melanogaster
FBal0235393 Hrb87F[KK108162]   Drosophila melanogaster

135 Clones

Secondary Identifier DB identifier
EK200056 FBcl0018100
EK148755 FBcl0018148
EK294034 FBcl0018294
EK024841 FBcl0018330
EK200411 FBcl0018342
EK168519 FBcl0018366
EK279324 FBcl0018388
EK303644 FBcl0018396
EK251554 FBcl0018426
EK206057 FBcl0018456
EK104516 FBcl0018476
EK115512 FBcl0018488
EK216748 FBcl0018518
EK196903 FBcl0018538
EK222332 FBcl0018548
EK227551 FBcl0018556
EK180732 FBcl0018628
EK295922 FBcl0018678
AT30712 FBcl0042959
AT19510 FBcl0042981
AT06910 FBcl0043019
bs79e07 FBcl0057829
EC30471 FBcl0073003
GH05625 FBcl0127943
GH22933 FBcl0130319
GH14932 FBcl0131711
GH26386 FBcl0133135
GM06625 FBcl0143593
GM03560 FBcl0143595
GM20443 FBcl0148334

7 Exons

DB identifier Symbol
FBgn0004237:7 Hrb87F:7
FBgn0004237:6 Hrb87F:6
FBgn0004237:5 Hrb87F:5
FBgn0004237:3 Hrb87F:3
FBgn0004237:4 Hrb87F:4
FBgn0004237:1 Hrb87F:1
FBgn0004237:2 Hrb87F:2

4 Transcripts

DB identifier Gene
FBtr0334495 Hrb87F
FBtr0300590 Hrb87F
FBtr0310621 Hrb87F
FBtr0082851 Hrb87F

8 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0082851-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0300590-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0310621-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0334495-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0082851-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0300590-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0310621-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0334495-3-prime-utr Drosophila melanogaster

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2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
48535 NCBI Entrez Gene identifiers FBgn0004237
71477 BioGRID FBgn0004237

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 3054.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 3378.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 2367.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 2859.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 2358.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 2892.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 2741.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 2179.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 2303.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 3857.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 3779.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 1832.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 2767.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 2627.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 3426.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 2252.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 3250.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 2400.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 3166.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 2673.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 2849.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 4156.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 2706.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 2535.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 2200.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 6268.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 5355.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 4854.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 4367.0
FBgn0004237 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 4531.0

6 Introns

DB identifier
Organism . Name
intron_FBgn0004237:7_FBgn0004237:6 Drosophila melanogaster
intron_FBgn0004237:6_FBgn0004237:5 Drosophila melanogaster
intron_FBgn0004237:5_FBgn0004237:3 Drosophila melanogaster
intron_FBgn0004237:5_FBgn0004237:4 Drosophila melanogaster
intron_FBgn0004237:5_FBgn0004237:1 Drosophila melanogaster
intron_FBgn0004237:5_FBgn0004237:2 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Hrb87F none -1.726080988   19067489
Lipid storage Hrb87F none 15.93080091   19067489
Alternative splicing Hrb87F Alternative Dscam (exon 4) splicing sp   15492211
mRNA decay Hrb87F No change np   15766526
Cell size and cell-cycle regulation (1) Hrb87F none sp   16496002
Microtubule assembly and organization Hrb87F Central spindle defect np   18463163
Heat nociception (1) Hrb87F none 1.6   21074052
Heart development and function (1) Hrb87F none 1   20371351
Self-renewal and differentiation in neural stem cells Hrb87F Neuroblast smaller cell size, neuroblast less large cells, ganglion mother cell shorter lineages, neuroblast loss, neuroblast loss with smaller neuroblast cell size, neuroblasts smaller, neuroblast underproliferation, lethal sp   21549331
RTK-Ras-ERK pathway regulation (1) Hrb87F none 0.04 0 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (1) Hrb87F none -0.46 10 minutes EGF stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Hrb87F none -0.46 30 minutes sSpitz stimulation 22028469
RTK-Ras-ERK pathway regulation (2) Hrb87F Decreased ERK phosphorylation after sSpitz and EGF stimulation -2.91 10 minutes sSpitz stimulation 22028469
Hippo pathway regulation Hrb87F none 0.37   23263283
Glycosylation regulation (1) Hrb87F none sp   21203496

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