modENCODE |  Help |  blog

Gene : Nckx30C D. melanogaster
DB identifier  ? FBgn0028704 Secondary Identifier  ? CG18660
Name  ? Nckx30C Source  FlyBase
  • synonyms:
  • potassium-dependent sodium/calcium,
  • FBgn0032141,
  • NcKX30C,
  • CG4106,
  • CG18660,
  • FBgn0042190,
  • FBan0018660,
  • FBgn0028704
Paste the following link
Lists
This Gene isn't in any lists. Upload a list.

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

18 Alleles

DB identifier Symbol Allele Class Organism
FBal0281858 Nckx30C[MI06363]   Drosophila melanogaster
FBal0281932 Nckx30C[MI07544]   Drosophila melanogaster
FBal0281425 Nckx30C[HMS01955]   Drosophila melanogaster
FBal0182558 Nckx30C[d09559]   Drosophila melanogaster
FBal0182555 Nckx30C[f04751]   Drosophila melanogaster
FBal0182556 Nckx30C[f04138]   Drosophila melanogaster
FBal0182557 Nckx30C[e00539]   Drosophila melanogaster
FBal0160141 Nckx30C[e00401]   Drosophila melanogaster
FBal0192659 Nckx30C[EY21869]   Drosophila melanogaster
FBal0217652 Nckx30C[MB07279]   Drosophila melanogaster
FBal0217684 Nckx30C[MB06102]   Drosophila melanogaster
FBal0239274 Nckx30C[JF02574]   Drosophila melanogaster
FBal0266659 Nckx30C[MI04696]   Drosophila melanogaster
FBal0269008 Nckx30C[HMS01375]   Drosophila melanogaster
FBal0269009 Nckx30C[HMS01376]   Drosophila melanogaster
FBal0207724 Nckx30C[GD1040]   Drosophila melanogaster
FBal0222565 Nckx30C[e00086]   Drosophila melanogaster
FBal0272929 Nckx30C[NIG.18660R]   Drosophila melanogaster

143 Clones

Secondary Identifier DB identifier
60019 FBcl0404476
Dmel_dig_017823_0653_3475 FBcl0373490
Dmel_dig_019599_0621_0546 FBcl0373491
EK064102 FBcl0033842
EK265820 FBcl0033966
EK137918 FBcl0034058
EK266521 FBcl0034114
EK169243 FBcl0034136
EK105437 FBcl0034156
EK164950 FBcl0034176
EK176728 FBcl0034194
EK267327 FBcl0034214
EK075405 FBcl0029956
EK305327 FBcl0034234
EK198553 FBcl0034256
EK142011 FBcl0029994
EK213956 FBcl0030010
EK146661 FBcl0034274
EK159225 FBcl0030088
EK168220 FBcl0030116
EK170605 FBcl0034314
EK016662 FBcl0034336
EK306226 FBcl0030150
EK173563 FBcl0034358
EK001859 FBcl0034378
EK265262 FBcl0034438
EK221651 FBcl0034480
EK197520 FBcl0034502
EK117512 FBcl0034600
EK160216 FBcl0034638

15 Exons

DB identifier Symbol
FBgn0028704:4 Nckx30C:4
FBgn0028704:3 Nckx30C:3
FBgn0028704:15 Nckx30C:15
FBgn0028704:13 Nckx30C:13
FBgn0028704:10 Nckx30C:10
FBgn0028704:9 Nckx30C:9
FBgn0028704:7 Nckx30C:7
FBgn0028704:5 Nckx30C:5
FBgn0028704:14 Nckx30C:14
FBgn0028704:12 Nckx30C:12
FBgn0028704:6 Nckx30C:6
FBgn0028704:2 Nckx30C:2
FBgn0028704:11 Nckx30C:11
FBgn0028704:8 Nckx30C:8
FBgn0028704:1 Nckx30C:1

5 Transcripts

DB identifier Gene
FBtr0335506 Nckx30C
FBtr0303909 Nckx30C
FBtr0079928 Nckx30C
FBtr0303908 Nckx30C
FBtr0079926 Nckx30C

10 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0079926-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0079928-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0303908-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0303909-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0335506-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0079926-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0079928-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0303908-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0303909-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0335506-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

10 Pathways

1 Cross References

Identifier
Source . Name
Subject . Primary Identifier
45248 NCBI Entrez Gene identifiers FBgn0028704

9 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier
Submission . Title
Cell Line . Name
Developmental Stage . Name 		Score
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 144.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 29.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 268.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 112.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 138.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 194.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 598.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 158.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 197.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 80.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 55.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 74.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 175.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 161.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 182.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 175.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 94.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 87.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 122.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 199.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 90.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 158.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 99.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 129.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 72.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 95.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 64.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 127.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 96.0
FBgn0028704 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 132.0

19 Introns

DB identifier
Organism . Name
intron_FBgn0028704:14_FBgn0028704:13 Drosophila melanogaster
intron_FBgn0028704:13_FBgn0028704:11 Drosophila melanogaster
intron_FBgn0028704:11_FBgn0028704:9 Drosophila melanogaster
intron_FBgn0028704:9_FBgn0028704:8 Drosophila melanogaster
intron_FBgn0028704:8_FBgn0028704:5 Drosophila melanogaster
intron_FBgn0028704:5_FBgn0028704:4 Drosophila melanogaster
intron_FBgn0028704:4_FBgn0028704:1 Drosophila melanogaster
intron_FBgn0028704:15_FBgn0028704:13 Drosophila melanogaster
intron_FBgn0028704:13_FBgn0028704:10 Drosophila melanogaster
intron_FBgn0028704:10_FBgn0028704:9 Drosophila melanogaster
intron_FBgn0028704:9_FBgn0028704:7 Drosophila melanogaster
intron_FBgn0028704:7_FBgn0028704:5 Drosophila melanogaster
intron_FBgn0028704:4_FBgn0028704:3 Drosophila melanogaster
intron_FBgn0028704:15_FBgn0028704:12 Drosophila melanogaster
intron_FBgn0028704:12_FBgn0028704:10 Drosophila melanogaster
intron_FBgn0028704:7_FBgn0028704:6 Drosophila melanogaster
intron_FBgn0028704:6_FBgn0028704:5 Drosophila melanogaster
intron_FBgn0028704:4_FBgn0028704:2 Drosophila melanogaster
intron_FBgn0028704:8_FBgn0028704:6 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Nckx30C none -1.543789365   19067489
Lipid storage Nckx30C none 0.78072598   19067489
Lipid storage Nckx30C none -0.70719068   19067489
Lipid storage Nckx30C none 0.080498328   19067489
Lipid storage Nckx30C none 0.111055232   19067489
Lipid storage Nckx30C none 0.059841263   19067489
Lipid storage Nckx30C none 2.629035544   19067489
Lipid storage Nckx30C none -1.704962601   19067489
Chlamydia caviae infection Nckx30C Decreased Chlamydia caviae infection np   17967059
Cell size and cell-cycle regulation (1) Nckx30C Decreased G1 DNA content sp   16496002
Cell size and cell-cycle regulation (1) Nckx30C none sp   16496002
Heat nociception (1) Nckx30C none 0.77   21074052
Heart development and function (1) Nckx30C none 1   20371351
Hippo pathway regulation Nckx30C none 0.95   23263283
Glycosylation regulation (1) Nckx30C Lethal np   21203496

0 Submissions





© 2002 - 2013 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom