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Gene : Spf45 D. melanogaster

DB identifier  ? FBgn0086683 Secondary Identifier  ? CG17540
Name  ? Spf45 Source  FlyBase
  • synonyms:
  • RBM17,
  • FBgn0062542,
  • CG17540,
  • spf-45,
  • SPF45,
  • RNA binding motif protein 1,
  • FBan0017540,
  • FBgn0086683,
  • dRBM17,
  • FBgn0040024,
  • dSPF45

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8 Alleles

DB identifier Symbol Allele Class Organism
FBal0263624 Spf45[GD9411]   Drosophila melanogaster
FBal0283337 Spf45[Scer\UAS.cLa]   Drosophila melanogaster
FBal0144539 Spf45[dsRNA.cLa]   Drosophila melanogaster
FBal0216866 Spf45[J23] loss of function allele Drosophila melanogaster
FBal0216867 Spf45[KG02503]   Drosophila melanogaster
FBal0216868 Spf45[+t3.1]   Drosophila melanogaster
FBal0279349 Spf45[HMS02351]   Drosophila melanogaster
FBal0272636 Spf45[NIG.17540R]   Drosophila melanogaster

59 Clones

Secondary Identifier DB identifier
DPiM_RE44883 FBcl0741698
DPiM_RE57542 FBcl0742048
RE44883 FBcl0294563
RE57542 FBcl0294567
33704 FBcl0405795
CK01.25D.A10 FBcl0405823
CK01.103C.D2 FBcl0405836
CK01.20D.G8 FBcl0405847
AT25717 FBcl0304100
LD27025 FBcl0338098
LD19028 FBcl0338099
EK284564 FBcl0338100
ESG019d.E21_H06 FBcl0338101
EC34138 FBcl0338102
RE32464 FBcl0338103
RE33705 FBcl0338104
RE34563 FBcl0338105
RE34576 FBcl0338106
RE47406 FBcl0338107
RE65482 FBcl0338108
RE67595 FBcl0338109
RE72949 FBcl0338110
RE73214 FBcl0338111
SD26842 FBcl0338112
EK164710 FBcl0338113
LD03875 FBcl0338114
LD20689 FBcl0338115
LD31618 FBcl0338116
GH12171 FBcl0338117
GH27706 FBcl0338118

5 Exons

DB identifier Symbol
FBgn0086683:5 Spf45:5
FBgn0086683:3 Spf45:3
FBgn0086683:1 Spf45:1
FBgn0086683:4 Spf45:4
FBgn0086683:2 Spf45:2

3 Transcripts

DB identifier Gene
FBtr0111239 Spf45
FBtr0111240 Spf45
FBtr0111241 Spf45

6 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0111239-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0111241-5-prime-utr Drosophila melanogaster
FivePrimeUTR FBtr0111240-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111239-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111241-3-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0111240-3-prime-utr Drosophila melanogaster

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Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
3355114 NCBI Entrez Gene identifiers FBgn0086683
78239 BioGRID FBgn0086683

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
TrEMBL data set http://www.ebi.ac.uk/trembl/
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 790.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 533.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 746.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 753.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 753.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 627.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 1229.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1099.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 1037.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 2166.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 1000.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 803.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 857.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 605.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 1026.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 541.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 999.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 763.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 1096.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 762.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 1110.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 748.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 778.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 662.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 1257.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 2131.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 1398.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 951.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 1083.0
FBgn0086683 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 1333.0

5 Introns

DB identifier
Organism . Name
intron_FBgn0086683:5_FBgn0086683:3 Drosophila melanogaster
intron_FBgn0086683:3_FBgn0086683:1 Drosophila melanogaster
intron_FBgn0086683:4_FBgn0086683:1 Drosophila melanogaster
intron_FBgn0086683:5_FBgn0086683:2 Drosophila melanogaster
intron_FBgn0086683:2_FBgn0086683:1 Drosophila melanogaster

15 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage Spf45 none -0.088724196   19067489
Lipid storage Spf45 none 0.504267341   19067489
Alternative splicing Spf45 none sp   15492211
Cell size and cell-cycle regulation (1) Spf45 none sp   16496002
Muscle morphogenesis and function (1) Spf45 none np   20220848
Heat nociception (1) Spf45 none -1.17   21074052
Heart development and function (1) Spf45 none 1   20371351
Heart development and function (2) Spf45 none 2.16   20371351
Notch pathway regulation (4) Spf45 none 0   19363474
Notch pathway regulation (4) Spf45 Bristle morphology defects 1   19363474
PGN-induced dJNK phosphorylation Spf45 Increased P-JNK protein expression with PGN 2.34 15 min PGN induction 19893628
Blood cell homeostasis regulation (1) Spf45 none np   20540764
Blood cell homeostasis regulation (2) Spf45 none np   20540764
Hippo pathway regulation Spf45 none -0.24   23263283
Glycosylation regulation (1) Spf45 none sp   21203496

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