modENCODE |  Help |  blog

Gene : GNBP3 D. melanogaster

DB identifier  ? FBgn0040321 Secondary Identifier  ? CG5008
Name  ? Gram-negative bacteria binding protein 3 Source  FlyBase
  • synonyms:
  • DGNBP-3,
  • GNBP-3,
  • FBgn0040321,
  • FBgn0035939,
  • Gram-negative binding protein 3,
  • Hades,
  • CG5008,
  • GNBP,
  • gnbp3,
  • FBan0005008

Sequence Feature Displayer

Publication Counts Displayer

Genomics

Gene Ontology Displayer

Homologue Displayer

Mod Mine G Browse Displayer

Overlapping Features Displayer

Regulatory Regions Displayer

7 Alleles

DB identifier Symbol Allele Class Organism
FBal0286496 GNBP3[Scer\UAS.ORF]   Drosophila melanogaster
FBal0286497 GNBP3[Scer\UAS.ORF.T:Ivir\HA1]   Drosophila melanogaster
FBal0240605 GNBP3[Scer\UAS.cGa]   Drosophila melanogaster
FBal0193731 GNBP3[hades]   Drosophila melanogaster
FBal0207081 GNBP3[GD2378]   Drosophila melanogaster
FBal0232820 GNBP3[KK104210]   Drosophila melanogaster
FBal0274477 GNBP3[NIG.5008R]   Drosophila melanogaster

13 Clones

Secondary Identifier DB identifier
EC33608 FBcl0071637
EC13792 FBcl0071639
EC26032 FBcl0071641
EK008629 FBcl0103490
GH17685 FBcl0125521
GH18612 FBcl0125547
GH17406 FBcl0125573
LP05991 FBcl0187623
LP12683 FBcl0187626
LP12732 FBcl0187633
SD21560 FBcl0289957
SD05835 FBcl0289958
CK01.5A.H9 FBcl0479541

1 Exons

DB identifier Symbol
FBgn0040321:1 GNBP3:1

1 Transcripts

DB identifier Gene
FBtr0076510 GNBP3

2 UTRs

Class DB identifier
Organism . Name
FivePrimeUTR FBtr0076510-5-prime-utr Drosophila melanogaster
ThreePrimeUTR FBtr0076510-3-prime-utr Drosophila melanogaster

Interactions

Cytoscape Network Displayer

 

Other

0 Pathways

2 Cross References

Identifier
Source . Name

Subject . Primary Identifier
39020 NCBI Entrez Gene identifiers FBgn0040321
64425 BioGRID FBgn0040321

11 Data Sets

Name URL
FlyBase data set for Drosophila melanogaster  
Swiss-Prot data set http://ca.expasy.org/sprot
Drosophila 12 Genomes Consortium homology  
GenomeRNAi data set  
TreeFam data set  
Panther data set  
IntAct interactions data set  
BioGRID interaction data set http://www.thebiogrid.org/downloads.php
GO Annotation from FlyBase  
FlyBase fasta data set for Drosophila melanogaster  
Drosophila Cell Line and Developmental Stage Gene and Exon Scores  

55 Expression Scores


Gene . Primary Identifier

Submission . Title

Cell Line . Name

Developmental Stage . Name
Score
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME L1 70.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Sg4 77.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD11 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c2 547.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD20-c5 201.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Kc167 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores GM2 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2-DRSC 1146.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S2R+ 269.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S1 674.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores 1182-4H 242.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD16-c3 244.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD32 920.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD17-c3 497.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD8 51.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W1 Cl.8+ 93.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD9 599.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG1-c1 199.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD21 676.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmD4-c1 32.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG3-c2 132.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores S3 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores CME W2 594.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores mbn2 764.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores ML-DmBG2-c2 19.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 0-2 h 44.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 2-4 h 6.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 4-6 h 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores Embryo 6-8 h 0.0
FBgn0040321 Drosophila Cell Line and Developmental Stage Gene and Exon Scores emb 8-10h 13.0

0 Introns

12 RNAi Results

Screen Gene Phenotype Score Conditions PubMed ID
Lipid storage GNBP3 none 0.867780555   19067489
Lipid storage GNBP3 none 1.469862671   19067489
Muscle morphogenesis and function (1) GNBP3 none np   20220848
Muscle morphogenesis and function (1) GNBP3 none np   20220848
Heat nociception (1) GNBP3 none 0.7   21074052
Heat nociception (1) GNBP3 Lethal -1.17   21074052
Serratia marcescens infection (1) GNBP3 none -0.85   19520911
Notch pathway regulation (4) GNBP3 none 0   19363474
Notch pathway regulation (4) GNBP3 none 0   19363474
Adiposity regulation (1) GNBP3 none 0.161   20074523
Hippo pathway regulation GNBP3 none -0.13   23263283
Glycosylation regulation (1) GNBP3 none sp   21203496

0 Submissions